RNA–Protein interactions for RNA: ENST00000562924.5

NPTN-204, Transcript of neuroplastin, humanhuman

TSL 1 (best) BASIC

Gene NPTN, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-204ENST00000562924 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
NPTN-204ENST00000562924 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
NPTN-204ENST00000562924 ABCC9O60706 1549 aa30.89■■■□□ 2.54
NPTN-204ENST00000562924 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
NPTN-204ENST00000562924 NACADO15069 1562 aa29.27■■■□□ 2.28
NPTN-204ENST00000562924 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
NPTN-204ENST00000562924 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
NPTN-204ENST00000562924 MYO15BQ96JP2 1530 aa28.88■■■□□ 2.21
NPTN-204ENST00000562924 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
NPTN-204ENST00000562924 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
NPTN-204ENST00000562924 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
NPTN-204ENST00000562924 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
NPTN-204ENST00000562924 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
NPTN-204ENST00000562924 SHROOM4Q9ULL8 1493 aa28.25■■■□□ 2.11
NPTN-204ENST00000562924 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
NPTN-204ENST00000562924 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
NPTN-204ENST00000562924 EIF4G1Q04637 1599 aaKnown RBP27.93■■■□□ 2.06
NPTN-204ENST00000562924 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
NPTN-204ENST00000562924 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
NPTN-204ENST00000562924 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
NPTN-204ENST00000562924 ATAD2BQ9ULI0 1458 aa26.9■■□□□ 1.9
NPTN-204ENST00000562924 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
NPTN-204ENST00000562924 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
NPTN-204ENST00000562924 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
NPTN-204ENST00000562924 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
NPTN-204ENST00000562924 CUX2O14529 1486 aa26.65■■□□□ 1.86
NPTN-204ENST00000562924 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
NPTN-204ENST00000562924 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.86
NPTN-204ENST00000562924 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
NPTN-204ENST00000562924 NESP48681 1621 aa26.57■■□□□ 1.84
NPTN-204ENST00000562924 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
NPTN-204ENST00000562924 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
NPTN-204ENST00000562924 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
NPTN-204ENST00000562924 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
NPTN-204ENST00000562924 WIZO95785 1651 aa26.31■■□□□ 1.8
NPTN-204ENST00000562924 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
NPTN-204ENST00000562924 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
NPTN-204ENST00000562924 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
NPTN-204ENST00000562924 WDR62O43379 1518 aa25.99■■□□□ 1.75
NPTN-204ENST00000562924 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
NPTN-204ENST00000562924 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
NPTN-204ENST00000562924 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
NPTN-204ENST00000562924 CFTRP13569 1480 aa25.86■■□□□ 1.73
NPTN-204ENST00000562924 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
NPTN-204ENST00000562924 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
NPTN-204ENST00000562924 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
NPTN-204ENST00000562924 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
NPTN-204ENST00000562924 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
NPTN-204ENST00000562924 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
NPTN-204ENST00000562924 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
NPTN-204ENST00000562924 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
NPTN-204ENST00000562924 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
NPTN-204ENST00000562924 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
NPTN-204ENST00000562924 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
NPTN-204ENST00000562924 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
NPTN-204ENST00000562924 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
NPTN-204ENST00000562924 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
NPTN-204ENST00000562924 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
NPTN-204ENST00000562924 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
NPTN-204ENST00000562924 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
NPTN-204ENST00000562924 CHD1O14646 1710 aa25.15■■□□□ 1.62
NPTN-204ENST00000562924 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
NPTN-204ENST00000562924 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.62e-6■■■□□ 15.8
NPTN-204ENST00000562924 ARHGEF11O15085 1522 aa25.04■■□□□ 1.6
NPTN-204ENST00000562924 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
NPTN-204ENST00000562924 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
NPTN-204ENST00000562924 CUX1P39880 1505 aa24.98■■□□□ 1.59
NPTN-204ENST00000562924 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
NPTN-204ENST00000562924 SOGA1O94964 1423 aa24.94■■□□□ 1.58
NPTN-204ENST00000562924 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
NPTN-204ENST00000562924 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
NPTN-204ENST00000562924 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
NPTN-204ENST00000562924 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
NPTN-204ENST00000562924 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
NPTN-204ENST00000562924 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
NPTN-204ENST00000562924 FBLN2P98095 1184 aa24.79■■□□□ 1.56
NPTN-204ENST00000562924 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
NPTN-204ENST00000562924 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
NPTN-204ENST00000562924 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
NPTN-204ENST00000562924 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
NPTN-204ENST00000562924 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
NPTN-204ENST00000562924 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
NPTN-204ENST00000562924 ABCA10Q8WWZ4 1543 aa24.7■■□□□ 1.54
NPTN-204ENST00000562924 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
NPTN-204ENST00000562924 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
NPTN-204ENST00000562924 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
NPTN-204ENST00000562924 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
NPTN-204ENST00000562924 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
NPTN-204ENST00000562924 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
NPTN-204ENST00000562924 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
NPTN-204ENST00000562924 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
NPTN-204ENST00000562924 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
NPTN-204ENST00000562924 NUP160Q12769 1436 aa24.4■■□□□ 1.5
NPTN-204ENST00000562924 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
NPTN-204ENST00000562924 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
NPTN-204ENST00000562924 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
NPTN-204ENST00000562924 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
NPTN-204ENST00000562924 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
NPTN-204ENST00000562924 CUL7Q14999 1698 aa24.11■■□□□ 1.45
NPTN-204ENST00000562924 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms