RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 AEBP2Q6ZN18 517 aaPredicted RBP39.17■■■■□ 3.86
RFX1-206ENST00000589760 CHIC1Q5VXU3 224 aa38.86■■■■□ 3.81
RFX1-206ENST00000589760 NISCHQ9Y2I1 1504 aa35.13■■■■□ 3.21
RFX1-206ENST00000589760 PHF23Q9BUL5 403 aaPredicted RBP34.19■■■■□ 3.06
RFX1-206ENST00000589760 SENP3Q9H4L4 574 aaPredicted RBP33.24■■■□□ 2.91
RFX1-206ENST00000589760 PLPPR3Q6T4P5 718 aa31.83■■■□□ 2.69
RFX1-206ENST00000589760 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
RFX1-206ENST00000589760 FOXD1Q16676 465 aa30.72■■■□□ 2.51
RFX1-206ENST00000589760 ABCC9O60706 1549 aa30.55■■■□□ 2.48
RFX1-206ENST00000589760 ADRA2BP18089 450 aa30■■■□□ 2.39
RFX1-206ENST00000589760 PPP6R1Q9UPN7 881 aa29.98■■■□□ 2.39
RFX1-206ENST00000589760 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
RFX1-206ENST00000589760 NACADO15069 1562 aa29.41■■■□□ 2.3
RFX1-206ENST00000589760 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
RFX1-206ENST00000589760 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.27
RFX1-206ENST00000589760 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.27
RFX1-206ENST00000589760 PIAS4Q8N2W9 510 aaPredicted RBP29.15■■■□□ 2.26
RFX1-206ENST00000589760 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
RFX1-206ENST00000589760 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
RFX1-206ENST00000589760 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
RFX1-206ENST00000589760 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
RFX1-206ENST00000589760 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
RFX1-206ENST00000589760 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
RFX1-206ENST00000589760 MSH5O43196 834 aa28.18■■■□□ 2.1
RFX1-206ENST00000589760 PPP4R3CPQ6ZMV5 832 aa28.09■■■□□ 2.09
RFX1-206ENST00000589760 KCNA4P22459 653 aa28.06■■■□□ 2.08
RFX1-206ENST00000589760 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
RFX1-206ENST00000589760 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
RFX1-206ENST00000589760 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
RFX1-206ENST00000589760 NCBP3Q53F19 620 aaKnown RBP27.58■■■□□ 2.01
RFX1-206ENST00000589760 SCAF1Q9H7N4 1312 aaKnown RBP27.53■■■□□ 2
RFX1-206ENST00000589760 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
RFX1-206ENST00000589760 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
RFX1-206ENST00000589760 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
RFX1-206ENST00000589760 CNKSR2Q8WXI2 1034 aa27.21■■□□□ 1.95
RFX1-206ENST00000589760 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
RFX1-206ENST00000589760 NPM3O75607 178 aaKnown RBP27.11■■□□□ 1.93
RFX1-206ENST00000589760 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
RFX1-206ENST00000589760 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
RFX1-206ENST00000589760 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
RFX1-206ENST00000589760 MAPK8IP2Q13387 824 aaPredicted RBP27.03■■□□□ 1.92
RFX1-206ENST00000589760 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
RFX1-206ENST00000589760 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
RFX1-206ENST00000589760 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
RFX1-206ENST00000589760 SLC4A1APQ9BWU0 796 aaKnown RBP26.86■■□□□ 1.89
RFX1-206ENST00000589760 WIZO95785 1651 aa26.85■■□□□ 1.89
RFX1-206ENST00000589760 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
RFX1-206ENST00000589760 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
RFX1-206ENST00000589760 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
RFX1-206ENST00000589760 RNF216Q9NWF9 866 aaPredicted RBP26.53■■□□□ 1.84
RFX1-206ENST00000589760 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
RFX1-206ENST00000589760 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
RFX1-206ENST00000589760 NESP48681 1621 aa26.43■■□□□ 1.82
RFX1-206ENST00000589760 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
RFX1-206ENST00000589760 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
RFX1-206ENST00000589760 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
RFX1-206ENST00000589760 HOXD11P31277 338 aaPredicted RBP26.26■■□□□ 1.79
RFX1-206ENST00000589760 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
RFX1-206ENST00000589760 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
RFX1-206ENST00000589760 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
RFX1-206ENST00000589760 CFTRP13569 1480 aa26.14■■□□□ 1.78
RFX1-206ENST00000589760 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
RFX1-206ENST00000589760 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
RFX1-206ENST00000589760 CUX2O14529 1486 aa26.07■■□□□ 1.76
RFX1-206ENST00000589760 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
RFX1-206ENST00000589760 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
RFX1-206ENST00000589760 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
RFX1-206ENST00000589760 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
RFX1-206ENST00000589760 WDR62O43379 1518 aa25.88■■□□□ 1.73
RFX1-206ENST00000589760 ZBTB22O15209 634 aa25.8■■□□□ 1.72
RFX1-206ENST00000589760 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
RFX1-206ENST00000589760 FOXD4L1Q9NU39 408 aa25.7■■□□□ 1.7
RFX1-206ENST00000589760 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
RFX1-206ENST00000589760 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
RFX1-206ENST00000589760 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
RFX1-206ENST00000589760 DCAF8L1A6NGE4 600 aa25.44■■□□□ 1.66
RFX1-206ENST00000589760 SLC4A2P04920 1241 aa25.44■■□□□ 1.66
RFX1-206ENST00000589760 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
RFX1-206ENST00000589760 CUX1P39880 1505 aa25.38■■□□□ 1.65
RFX1-206ENST00000589760 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
RFX1-206ENST00000589760 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
RFX1-206ENST00000589760 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
RFX1-206ENST00000589760 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
RFX1-206ENST00000589760 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
RFX1-206ENST00000589760 SOGA1O94964 1423 aa25.26■■□□□ 1.63
RFX1-206ENST00000589760 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
RFX1-206ENST00000589760 RAD54L2Q9Y4B4 1467 aa25.25■■□□□ 1.63
RFX1-206ENST00000589760 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
RFX1-206ENST00000589760 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
RFX1-206ENST00000589760 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
RFX1-206ENST00000589760 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
RFX1-206ENST00000589760 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
RFX1-206ENST00000589760 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.629e-7■■■■■ 31.2
RFX1-206ENST00000589760 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
RFX1-206ENST00000589760 MYCNP04198 464 aaPredicted RBP25.08■■□□□ 1.61
RFX1-206ENST00000589760 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
RFX1-206ENST00000589760 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
RFX1-206ENST00000589760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
RFX1-206ENST00000589760 CHD1O14646 1710 aa25.03■■□□□ 1.6
RFX1-206ENST00000589760 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms