RNA–Protein interactions for RNA: ENST00000564551.1

NPTN-207, Transcript of neuroplastin, humanhuman

TSL 3

Gene NPTN, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-207ENST00000564551 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
NPTN-207ENST00000564551 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
NPTN-207ENST00000564551 ABCC9O60706 1549 aa31.61■■■□□ 2.65
NPTN-207ENST00000564551 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
NPTN-207ENST00000564551 NACADO15069 1562 aa30.04■■■□□ 2.4
NPTN-207ENST00000564551 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
NPTN-207ENST00000564551 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
NPTN-207ENST00000564551 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
NPTN-207ENST00000564551 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
NPTN-207ENST00000564551 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
NPTN-207ENST00000564551 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.3
NPTN-207ENST00000564551 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
NPTN-207ENST00000564551 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
NPTN-207ENST00000564551 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
NPTN-207ENST00000564551 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
NPTN-207ENST00000564551 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
NPTN-207ENST00000564551 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
NPTN-207ENST00000564551 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
NPTN-207ENST00000564551 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
NPTN-207ENST00000564551 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
NPTN-207ENST00000564551 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
NPTN-207ENST00000564551 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
NPTN-207ENST00000564551 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
NPTN-207ENST00000564551 HMGXB3Q12766 1538 aa27.54■■■□□ 2
NPTN-207ENST00000564551 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
NPTN-207ENST00000564551 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
NPTN-207ENST00000564551 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
NPTN-207ENST00000564551 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
NPTN-207ENST00000564551 NESP48681 1621 aa27.23■■□□□ 1.95
NPTN-207ENST00000564551 CUX2O14529 1486 aa27.15■■□□□ 1.94
NPTN-207ENST00000564551 WIZO95785 1651 aa27.08■■□□□ 1.93
NPTN-207ENST00000564551 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
NPTN-207ENST00000564551 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
NPTN-207ENST00000564551 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
NPTN-207ENST00000564551 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
NPTN-207ENST00000564551 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
NPTN-207ENST00000564551 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
NPTN-207ENST00000564551 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
NPTN-207ENST00000564551 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
NPTN-207ENST00000564551 CFTRP13569 1480 aa26.69■■□□□ 1.86
NPTN-207ENST00000564551 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
NPTN-207ENST00000564551 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
NPTN-207ENST00000564551 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
NPTN-207ENST00000564551 WDR62O43379 1518 aa26.59■■□□□ 1.85
NPTN-207ENST00000564551 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
NPTN-207ENST00000564551 URB2Q14146 1524 aaKnown RBP26.38■■□□□ 1.81
NPTN-207ENST00000564551 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
NPTN-207ENST00000564551 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
NPTN-207ENST00000564551 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
NPTN-207ENST00000564551 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
NPTN-207ENST00000564551 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
NPTN-207ENST00000564551 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
NPTN-207ENST00000564551 OSCARQ8IYS5 282 aa26.01■■□□□ 1.75
NPTN-207ENST00000564551 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
NPTN-207ENST00000564551 POLA1P09884 1462 aaPredicted RBP25.88■■□□□ 1.73
NPTN-207ENST00000564551 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
NPTN-207ENST00000564551 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.732e-6■■□□□ 13.1
NPTN-207ENST00000564551 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
NPTN-207ENST00000564551 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
NPTN-207ENST00000564551 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
NPTN-207ENST00000564551 SOGA1O94964 1423 aa25.79■■□□□ 1.72
NPTN-207ENST00000564551 CUX1P39880 1505 aa25.76■■□□□ 1.71
NPTN-207ENST00000564551 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
NPTN-207ENST00000564551 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
NPTN-207ENST00000564551 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
NPTN-207ENST00000564551 FBLN2P98095 1184 aa25.59■■□□□ 1.69
NPTN-207ENST00000564551 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
NPTN-207ENST00000564551 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
NPTN-207ENST00000564551 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
NPTN-207ENST00000564551 CHD1O14646 1710 aa25.54■■□□□ 1.68
NPTN-207ENST00000564551 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
NPTN-207ENST00000564551 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
NPTN-207ENST00000564551 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
NPTN-207ENST00000564551 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
NPTN-207ENST00000564551 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
NPTN-207ENST00000564551 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
NPTN-207ENST00000564551 GAPVD1Q14C86 1478 aa25.46■■□□□ 1.67
NPTN-207ENST00000564551 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
NPTN-207ENST00000564551 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
NPTN-207ENST00000564551 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
NPTN-207ENST00000564551 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
NPTN-207ENST00000564551 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
NPTN-207ENST00000564551 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
NPTN-207ENST00000564551 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
NPTN-207ENST00000564551 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
NPTN-207ENST00000564551 PBRM1Q86U86 1689 aa25.33■■□□□ 1.65
NPTN-207ENST00000564551 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
NPTN-207ENST00000564551 GRIN2AQ12879 1464 aa25.18■■□□□ 1.62
NPTN-207ENST00000564551 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
NPTN-207ENST00000564551 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
NPTN-207ENST00000564551 ERICH3Q5RHP9 1530 aa25.15■■□□□ 1.62
NPTN-207ENST00000564551 NUP160Q12769 1436 aa25.12■■□□□ 1.61
NPTN-207ENST00000564551 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
NPTN-207ENST00000564551 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
NPTN-207ENST00000564551 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
NPTN-207ENST00000564551 IGF1RP08069 1367 aa24.96■■□□□ 1.59
NPTN-207ENST00000564551 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
NPTN-207ENST00000564551 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
NPTN-207ENST00000564551 JPH4Q96JJ6 628 aa24.9■■□□□ 1.58
NPTN-207ENST00000564551 PRG4Q92954 1404 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms