RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
CTTN-210ENST00000525852 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
CTTN-210ENST00000525852 ABCC9O60706 1549 aa25.95■■□□□ 1.75
CTTN-210ENST00000525852 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
CTTN-210ENST00000525852 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
CTTN-210ENST00000525852 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
CTTN-210ENST00000525852 NACADO15069 1562 aa24.91■■□□□ 1.58
CTTN-210ENST00000525852 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
CTTN-210ENST00000525852 DCAF1Q9Y4B6 1507 aa24.69■■□□□ 1.54
CTTN-210ENST00000525852 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
CTTN-210ENST00000525852 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
CTTN-210ENST00000525852 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
CTTN-210ENST00000525852 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
CTTN-210ENST00000525852 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
CTTN-210ENST00000525852 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
CTTN-210ENST00000525852 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
CTTN-210ENST00000525852 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
CTTN-210ENST00000525852 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.32
CTTN-210ENST00000525852 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
CTTN-210ENST00000525852 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
CTTN-210ENST00000525852 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
CTTN-210ENST00000525852 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
CTTN-210ENST00000525852 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
CTTN-210ENST00000525852 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
CTTN-210ENST00000525852 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
CTTN-210ENST00000525852 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
CTTN-210ENST00000525852 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
CTTN-210ENST00000525852 WIZO95785 1651 aa22.84■■□□□ 1.25
CTTN-210ENST00000525852 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
CTTN-210ENST00000525852 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
CTTN-210ENST00000525852 NESP48681 1621 aa22.5■■□□□ 1.19
CTTN-210ENST00000525852 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
CTTN-210ENST00000525852 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
CTTN-210ENST00000525852 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
CTTN-210ENST00000525852 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
CTTN-210ENST00000525852 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
CTTN-210ENST00000525852 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
CTTN-210ENST00000525852 CFTRP13569 1480 aa22.22■■□□□ 1.15
CTTN-210ENST00000525852 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
CTTN-210ENST00000525852 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
CTTN-210ENST00000525852 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
CTTN-210ENST00000525852 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
CTTN-210ENST00000525852 CUX2O14529 1486 aa22.04■■□□□ 1.12
CTTN-210ENST00000525852 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
CTTN-210ENST00000525852 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
CTTN-210ENST00000525852 WDR62O43379 1518 aa21.96■■□□□ 1.11
CTTN-210ENST00000525852 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
CTTN-210ENST00000525852 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
CTTN-210ENST00000525852 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
CTTN-210ENST00000525852 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
CTTN-210ENST00000525852 CUX1P39880 1505 aa21.64■■□□□ 1.05
CTTN-210ENST00000525852 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
CTTN-210ENST00000525852 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
CTTN-210ENST00000525852 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
CTTN-210ENST00000525852 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
CTTN-210ENST00000525852 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
CTTN-210ENST00000525852 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
CTTN-210ENST00000525852 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
CTTN-210ENST00000525852 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
CTTN-210ENST00000525852 SOGA1O94964 1423 aa21.45■■□□□ 1.03
CTTN-210ENST00000525852 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
CTTN-210ENST00000525852 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
CTTN-210ENST00000525852 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
CTTN-210ENST00000525852 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.025e-9■■■■□ 21.2
CTTN-210ENST00000525852 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
CTTN-210ENST00000525852 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
CTTN-210ENST00000525852 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
CTTN-210ENST00000525852 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
CTTN-210ENST00000525852 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CTTN-210ENST00000525852 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
CTTN-210ENST00000525852 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
CTTN-210ENST00000525852 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
CTTN-210ENST00000525852 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
CTTN-210ENST00000525852 CHD1O14646 1710 aa21.18■□□□□ 0.98
CTTN-210ENST00000525852 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
CTTN-210ENST00000525852 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
CTTN-210ENST00000525852 FBLN2P98095 1184 aa21.09■□□□□ 0.97
CTTN-210ENST00000525852 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
CTTN-210ENST00000525852 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
CTTN-210ENST00000525852 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
CTTN-210ENST00000525852 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
CTTN-210ENST00000525852 KIF27Q86VH2 1401 aa21■□□□□ 0.95
CTTN-210ENST00000525852 TRIM41Q8WV44 630 aa21■□□□□ 0.95
CTTN-210ENST00000525852 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
CTTN-210ENST00000525852 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
CTTN-210ENST00000525852 IGF1RP08069 1367 aa20.93■□□□□ 0.94
CTTN-210ENST00000525852 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
CTTN-210ENST00000525852 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
CTTN-210ENST00000525852 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
CTTN-210ENST00000525852 CUL7Q14999 1698 aa20.87■□□□□ 0.93
CTTN-210ENST00000525852 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
CTTN-210ENST00000525852 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
CTTN-210ENST00000525852 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
CTTN-210ENST00000525852 NUP160Q12769 1436 aa20.85■□□□□ 0.93
CTTN-210ENST00000525852 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
CTTN-210ENST00000525852 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
CTTN-210ENST00000525852 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
CTTN-210ENST00000525852 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
CTTN-210ENST00000525852 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
CTTN-210ENST00000525852 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms