RNA–Protein interactions for RNA: ENST00000563691.5

NPTN-205, Transcript of neuroplastin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTN, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-205ENST00000563691 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
NPTN-205ENST00000563691 ABCC9O60706 1549 aa27.8■■■□□ 2.04
NPTN-205ENST00000563691 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
NPTN-205ENST00000563691 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
NPTN-205ENST00000563691 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
NPTN-205ENST00000563691 NACADO15069 1562 aa26.22■■□□□ 1.79
NPTN-205ENST00000563691 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
NPTN-205ENST00000563691 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
NPTN-205ENST00000563691 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
NPTN-205ENST00000563691 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
NPTN-205ENST00000563691 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
NPTN-205ENST00000563691 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
NPTN-205ENST00000563691 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
NPTN-205ENST00000563691 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
NPTN-205ENST00000563691 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
NPTN-205ENST00000563691 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
NPTN-205ENST00000563691 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
NPTN-205ENST00000563691 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
NPTN-205ENST00000563691 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
NPTN-205ENST00000563691 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
NPTN-205ENST00000563691 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
NPTN-205ENST00000563691 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
NPTN-205ENST00000563691 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
NPTN-205ENST00000563691 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
NPTN-205ENST00000563691 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
NPTN-205ENST00000563691 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
NPTN-205ENST00000563691 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
NPTN-205ENST00000563691 CUX2O14529 1486 aa23.91■■□□□ 1.42
NPTN-205ENST00000563691 NESP48681 1621 aa23.86■■□□□ 1.41
NPTN-205ENST00000563691 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
NPTN-205ENST00000563691 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
NPTN-205ENST00000563691 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
NPTN-205ENST00000563691 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
NPTN-205ENST00000563691 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
NPTN-205ENST00000563691 WIZO95785 1651 aa23.51■■□□□ 1.35
NPTN-205ENST00000563691 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
NPTN-205ENST00000563691 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
NPTN-205ENST00000563691 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
NPTN-205ENST00000563691 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
NPTN-205ENST00000563691 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
NPTN-205ENST00000563691 CFTRP13569 1480 aa23.24■■□□□ 1.31
NPTN-205ENST00000563691 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
NPTN-205ENST00000563691 WDR62O43379 1518 aa23.23■■□□□ 1.31
NPTN-205ENST00000563691 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
NPTN-205ENST00000563691 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
NPTN-205ENST00000563691 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
NPTN-205ENST00000563691 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
NPTN-205ENST00000563691 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
NPTN-205ENST00000563691 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
NPTN-205ENST00000563691 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
NPTN-205ENST00000563691 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
NPTN-205ENST00000563691 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
NPTN-205ENST00000563691 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
NPTN-205ENST00000563691 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
NPTN-205ENST00000563691 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.212e-6■■■□□ 15.8
NPTN-205ENST00000563691 FBLN2P98095 1184 aa22.57■■□□□ 1.2
NPTN-205ENST00000563691 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
NPTN-205ENST00000563691 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
NPTN-205ENST00000563691 SOGA1O94964 1423 aa22.54■■□□□ 1.2
NPTN-205ENST00000563691 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
NPTN-205ENST00000563691 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
NPTN-205ENST00000563691 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
NPTN-205ENST00000563691 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
NPTN-205ENST00000563691 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
NPTN-205ENST00000563691 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
NPTN-205ENST00000563691 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
NPTN-205ENST00000563691 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
NPTN-205ENST00000563691 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
NPTN-205ENST00000563691 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
NPTN-205ENST00000563691 CUX1P39880 1505 aa22.38■■□□□ 1.17
NPTN-205ENST00000563691 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
NPTN-205ENST00000563691 CHD1O14646 1710 aa22.36■■□□□ 1.17
NPTN-205ENST00000563691 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
NPTN-205ENST00000563691 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
NPTN-205ENST00000563691 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
NPTN-205ENST00000563691 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
NPTN-205ENST00000563691 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
NPTN-205ENST00000563691 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
NPTN-205ENST00000563691 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
NPTN-205ENST00000563691 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
NPTN-205ENST00000563691 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
NPTN-205ENST00000563691 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
NPTN-205ENST00000563691 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
NPTN-205ENST00000563691 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
NPTN-205ENST00000563691 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
NPTN-205ENST00000563691 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
NPTN-205ENST00000563691 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
NPTN-205ENST00000563691 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
NPTN-205ENST00000563691 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
NPTN-205ENST00000563691 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
NPTN-205ENST00000563691 NUP160Q12769 1436 aa21.89■■□□□ 1.1
NPTN-205ENST00000563691 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
NPTN-205ENST00000563691 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
NPTN-205ENST00000563691 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
NPTN-205ENST00000563691 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
NPTN-205ENST00000563691 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
NPTN-205ENST00000563691 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
NPTN-205ENST00000563691 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
NPTN-205ENST00000563691 IGF1RP08069 1367 aa21.7■■□□□ 1.06
NPTN-205ENST00000563691 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms