RNA–Protein interactions for RNA: ENST00000563753.1

NPTN-206, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-206ENST00000563753 NISCHQ9Y2I1 1504 aa38.58■■■■□ 3.77
NPTN-206ENST00000563753 ABCC9O60706 1549 aa35.06■■■■□ 3.2
NPTN-206ENST00000563753 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
NPTN-206ENST00000563753 DNAJC5BQ9UF47 199 aa33.21■■■□□ 2.91
NPTN-206ENST00000563753 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
NPTN-206ENST00000563753 NACADO15069 1562 aa32.9■■■□□ 2.86
NPTN-206ENST00000563753 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
NPTN-206ENST00000563753 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
NPTN-206ENST00000563753 MYO15BQ96JP2 1530 aa32.35■■■□□ 2.77
NPTN-206ENST00000563753 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.75
NPTN-206ENST00000563753 BICRAQ9NZM4 1560 aa32.2■■■□□ 2.75
NPTN-206ENST00000563753 ZCCHC6Q5VYS8 1495 aaKnown RBP31.89■■■□□ 2.7
NPTN-206ENST00000563753 DCAF1Q9Y4B6 1507 aa31.82■■■□□ 2.68
NPTN-206ENST00000563753 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
NPTN-206ENST00000563753 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
NPTN-206ENST00000563753 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
NPTN-206ENST00000563753 CC2D2AQ9P2K1 1620 aa31.59■■■□□ 2.65
NPTN-206ENST00000563753 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
NPTN-206ENST00000563753 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
NPTN-206ENST00000563753 NCAPD3P42695 1498 aa30.43■■■□□ 2.46
NPTN-206ENST00000563753 CUX2O14529 1486 aa30.31■■■□□ 2.44
NPTN-206ENST00000563753 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
NPTN-206ENST00000563753 ATAD2BQ9ULI0 1458 aa30.29■■■□□ 2.44
NPTN-206ENST00000563753 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
NPTN-206ENST00000563753 HMGXB3Q12766 1538 aa30.1■■■□□ 2.41
NPTN-206ENST00000563753 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
NPTN-206ENST00000563753 NESP48681 1621 aa30.02■■■□□ 2.4
NPTN-206ENST00000563753 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
NPTN-206ENST00000563753 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.39
NPTN-206ENST00000563753 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
NPTN-206ENST00000563753 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
NPTN-206ENST00000563753 LAMC3Q9Y6N6 1575 aa29.72■■■□□ 2.35
NPTN-206ENST00000563753 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
NPTN-206ENST00000563753 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
NPTN-206ENST00000563753 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
NPTN-206ENST00000563753 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
NPTN-206ENST00000563753 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
NPTN-206ENST00000563753 WIZO95785 1651 aa29.29■■■□□ 2.28
NPTN-206ENST00000563753 WDR62O43379 1518 aa29.27■■■□□ 2.28
NPTN-206ENST00000563753 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
NPTN-206ENST00000563753 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
NPTN-206ENST00000563753 FANCD2Q9BXW9 1451 aa29.15■■■□□ 2.26
NPTN-206ENST00000563753 CFTRP13569 1480 aa29.09■■■□□ 2.25
NPTN-206ENST00000563753 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
NPTN-206ENST00000563753 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
NPTN-206ENST00000563753 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
NPTN-206ENST00000563753 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
NPTN-206ENST00000563753 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
NPTN-206ENST00000563753 IFT140Q96RY7 1462 aa28.64■■■□□ 2.17
NPTN-206ENST00000563753 ZNF608Q9ULD9 1512 aaPredicted RBP28.62■■■□□ 2.17
NPTN-206ENST00000563753 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
NPTN-206ENST00000563753 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
NPTN-206ENST00000563753 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
NPTN-206ENST00000563753 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
NPTN-206ENST00000563753 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
NPTN-206ENST00000563753 ABCC8Q09428 1581 aa28.48■■■□□ 2.15
NPTN-206ENST00000563753 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
NPTN-206ENST00000563753 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
NPTN-206ENST00000563753 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
NPTN-206ENST00000563753 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
NPTN-206ENST00000563753 CYB5RLQ6IPT4 315 aa28.34■■■□□ 2.13
NPTN-206ENST00000563753 FBLN2P98095 1184 aa28.29■■■□□ 2.12
NPTN-206ENST00000563753 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
NPTN-206ENST00000563753 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
NPTN-206ENST00000563753 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
NPTN-206ENST00000563753 SOGA1O94964 1423 aa28.16■■■□□ 2.1
NPTN-206ENST00000563753 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
NPTN-206ENST00000563753 CHD1O14646 1710 aa28.14■■■□□ 2.1
NPTN-206ENST00000563753 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
NPTN-206ENST00000563753 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
NPTN-206ENST00000563753 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
NPTN-206ENST00000563753 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
NPTN-206ENST00000563753 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
NPTN-206ENST00000563753 WDR97A6NE52 1622 aa27.94■■■□□ 2.06
NPTN-206ENST00000563753 CUX1P39880 1505 aa27.93■■■□□ 2.06
NPTN-206ENST00000563753 MAGI1Q96QZ7 1491 aaPredicted RBP27.93■■■□□ 2.06
NPTN-206ENST00000563753 GRIN2BQ13224 1484 aa27.92■■■□□ 2.06
NPTN-206ENST00000563753 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
NPTN-206ENST00000563753 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
NPTN-206ENST00000563753 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
NPTN-206ENST00000563753 GAPVD1Q14C86 1478 aa27.78■■■□□ 2.04
NPTN-206ENST00000563753 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
NPTN-206ENST00000563753 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
NPTN-206ENST00000563753 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
NPTN-206ENST00000563753 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
NPTN-206ENST00000563753 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 2
NPTN-206ENST00000563753 GRIN2AQ12879 1464 aa27.54■■■□□ 2
NPTN-206ENST00000563753 AEBP2Q6ZN18 517 aaPredicted RBP27.52■■■□□ 2
NPTN-206ENST00000563753 NUP160Q12769 1436 aa27.47■■□□□ 1.99
NPTN-206ENST00000563753 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
NPTN-206ENST00000563753 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
NPTN-206ENST00000563753 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
NPTN-206ENST00000563753 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
NPTN-206ENST00000563753 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
NPTN-206ENST00000563753 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
NPTN-206ENST00000563753 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
NPTN-206ENST00000563753 SHROOM2Q13796 1616 aa27.29■■□□□ 1.96
NPTN-206ENST00000563753 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
NPTN-206ENST00000563753 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
NPTN-206ENST00000563753 NPM1P06748 294 aaKnown RBP eCLIP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms