RNA–Protein interactions for RNA: ENST00000548697.5

LARP4-213, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 5

Gene LARP4, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-213ENST00000548697 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
LARP4-213ENST00000548697 ABCC9O60706 1549 aa30.27■■■□□ 2.44
LARP4-213ENST00000548697 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.44
LARP4-213ENST00000548697 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
LARP4-213ENST00000548697 NACADO15069 1562 aa28.6■■■□□ 2.17
LARP4-213ENST00000548697 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
LARP4-213ENST00000548697 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
LARP4-213ENST00000548697 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
LARP4-213ENST00000548697 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
LARP4-213ENST00000548697 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
LARP4-213ENST00000548697 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
LARP4-213ENST00000548697 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
LARP4-213ENST00000548697 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
LARP4-213ENST00000548697 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
LARP4-213ENST00000548697 SCRIBQ14160 1630 aa27.56■■■□□ 2
LARP4-213ENST00000548697 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
LARP4-213ENST00000548697 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
LARP4-213ENST00000548697 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
LARP4-213ENST00000548697 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
LARP4-213ENST00000548697 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
LARP4-213ENST00000548697 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
LARP4-213ENST00000548697 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
LARP4-213ENST00000548697 SMARCA2P51531 1590 aa26.25■■□□□ 1.79
LARP4-213ENST00000548697 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
LARP4-213ENST00000548697 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
LARP4-213ENST00000548697 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
LARP4-213ENST00000548697 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
LARP4-213ENST00000548697 CUX2O14529 1486 aa26.12■■□□□ 1.77
LARP4-213ENST00000548697 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
LARP4-213ENST00000548697 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
LARP4-213ENST00000548697 NESP48681 1621 aa25.98■■□□□ 1.75
LARP4-213ENST00000548697 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
LARP4-213ENST00000548697 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
LARP4-213ENST00000548697 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
LARP4-213ENST00000548697 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
LARP4-213ENST00000548697 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
LARP4-213ENST00000548697 WIZO95785 1651 aa25.64■■□□□ 1.69
LARP4-213ENST00000548697 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
LARP4-213ENST00000548697 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
LARP4-213ENST00000548697 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.66
LARP4-213ENST00000548697 WDR62O43379 1518 aa25.38■■□□□ 1.65
LARP4-213ENST00000548697 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
LARP4-213ENST00000548697 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
LARP4-213ENST00000548697 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
LARP4-213ENST00000548697 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
LARP4-213ENST00000548697 CFTRP13569 1480 aa25.27■■□□□ 1.64
LARP4-213ENST00000548697 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
LARP4-213ENST00000548697 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
LARP4-213ENST00000548697 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
LARP4-213ENST00000548697 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
LARP4-213ENST00000548697 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
LARP4-213ENST00000548697 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
LARP4-213ENST00000548697 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
LARP4-213ENST00000548697 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
LARP4-213ENST00000548697 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
LARP4-213ENST00000548697 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
LARP4-213ENST00000548697 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
LARP4-213ENST00000548697 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
LARP4-213ENST00000548697 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
LARP4-213ENST00000548697 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
LARP4-213ENST00000548697 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
LARP4-213ENST00000548697 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.524e-8■■■■■ 32.5
LARP4-213ENST00000548697 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
LARP4-213ENST00000548697 CHD1O14646 1710 aa24.53■■□□□ 1.52
LARP4-213ENST00000548697 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
LARP4-213ENST00000548697 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
LARP4-213ENST00000548697 SOGA1O94964 1423 aa24.44■■□□□ 1.5
LARP4-213ENST00000548697 FBLN2P98095 1184 aa24.44■■□□□ 1.5
LARP4-213ENST00000548697 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
LARP4-213ENST00000548697 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
LARP4-213ENST00000548697 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
LARP4-213ENST00000548697 CUX1P39880 1505 aa24.35■■□□□ 1.49
LARP4-213ENST00000548697 CYB5RLQ6IPT4 315 aa24.34■■□□□ 1.49
LARP4-213ENST00000548697 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
LARP4-213ENST00000548697 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
LARP4-213ENST00000548697 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
LARP4-213ENST00000548697 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
LARP4-213ENST00000548697 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
LARP4-213ENST00000548697 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
LARP4-213ENST00000548697 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LARP4-213ENST00000548697 PBRM1Q86U86 1689 aa24.2■■□□□ 1.46
LARP4-213ENST00000548697 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
LARP4-213ENST00000548697 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
LARP4-213ENST00000548697 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
LARP4-213ENST00000548697 TRHP20396 242 aaPredicted RBP24.13■■□□□ 1.45
LARP4-213ENST00000548697 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
LARP4-213ENST00000548697 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
LARP4-213ENST00000548697 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
LARP4-213ENST00000548697 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
LARP4-213ENST00000548697 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
LARP4-213ENST00000548697 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
LARP4-213ENST00000548697 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
LARP4-213ENST00000548697 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
LARP4-213ENST00000548697 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
LARP4-213ENST00000548697 NUP160Q12769 1436 aa23.84■■□□□ 1.41
LARP4-213ENST00000548697 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
LARP4-213ENST00000548697 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
LARP4-213ENST00000548697 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
LARP4-213ENST00000548697 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
LARP4-213ENST00000548697 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms