Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SIX6O95475 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.9■□□□□ 0.3
SIX6O95475 AC103724.3-201ENST00000564481 992 ntBASIC16.9■□□□□ 0.3
SIX6O95475 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.9■□□□□ 0.3
SIX6O95475 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SIX6O95475 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.9■□□□□ 0.3
SIX6O95475 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX6O95475 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.89■□□□□ 0.3
SIX6O95475 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SIX6O95475 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.89■□□□□ 0.3
SIX6O95475 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.89■□□□□ 0.3
SIX6O95475 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX6O95475 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SIX6O95475 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SIX6O95475 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX6O95475 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SIX6O95475 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SIX6O95475 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX6O95475 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX6O95475 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX6O95475 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.88■□□□□ 0.29
SIX6O95475 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SIX6O95475 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.88■□□□□ 0.29
SIX6O95475 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX6O95475 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.88■□□□□ 0.29
SIX6O95475 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.88■□□□□ 0.29
SIX6O95475 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.88■□□□□ 0.29
SIX6O95475 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SIX6O95475 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX6O95475 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX6O95475 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SIX6O95475 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.87■□□□□ 0.29
SIX6O95475 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX6O95475 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SIX6O95475 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 Z82202.1-201ENST00000623446 1880 ntBASIC16.87■□□□□ 0.29
SIX6O95475 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 AC004987.1-201ENST00000428627 508 ntBASIC16.87■□□□□ 0.29
SIX6O95475 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX6O95475 AC103834.1-201ENST00000520383 144 ntBASIC16.87■□□□□ 0.29
SIX6O95475 AC241377.3-202ENST00000626088 1088 ntBASIC16.87■□□□□ 0.29
SIX6O95475 AC241585.3-202ENST00000628937 1088 ntBASIC16.87■□□□□ 0.29
SIX6O95475 AC245100.8-202ENST00000629247 1058 ntBASIC16.87■□□□□ 0.29
SIX6O95475 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SIX6O95475 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 AC018470.1-201ENST00000624790 3129 ntBASIC16.87■□□□□ 0.29
SIX6O95475 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX6O95475 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX6O95475 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SIX6O95475 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SIX6O95475 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.86■□□□□ 0.29
SIX6O95475 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX6O95475 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SIX6O95475 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX6O95475 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms