RNA–Protein interactions for RNA: ENST00000411754.5

H19-201, H19, imprinted maternally expressed transcript, humanhuman

TSL 5 BASIC

Gene H19, Length 1,788 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-201ENST00000411754 NISCHQ9Y2I1 1504 aa46.82■■■■■ 5.09
H19-201ENST00000411754 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
H19-201ENST00000411754 ABCC9O60706 1549 aa39.24■■■■□ 3.87
H19-201ENST00000411754 ZCCHC6Q5VYS8 1495 aaKnown RBP39.23■■■■□ 3.87
H19-201ENST00000411754 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
H19-201ENST00000411754 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
H19-201ENST00000411754 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.73
H19-201ENST00000411754 NACADO15069 1562 aa38.31■■■■□ 3.72
H19-201ENST00000411754 RB1CC1Q8TDY2 1594 aa38.09■■■■□ 3.69
H19-201ENST00000411754 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
H19-201ENST00000411754 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
H19-201ENST00000411754 UNC13AQ9UPW8 1703 aa37.45■■■■□ 3.59
H19-201ENST00000411754 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
H19-201ENST00000411754 PABPN1Q86U42 306 aaKnown RBP eCLIP36.9■■■■□ 3.5
H19-201ENST00000411754 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
H19-201ENST00000411754 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
H19-201ENST00000411754 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
H19-201ENST00000411754 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
H19-201ENST00000411754 RSF1Q96T23 1441 aaPredicted RBP36.14■■■■□ 3.38
H19-201ENST00000411754 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
H19-201ENST00000411754 EIF4G1Q04637 1599 aaKnown RBP35.91■■■■□ 3.34
H19-201ENST00000411754 WIZO95785 1651 aa35.9■■■■□ 3.34
H19-201ENST00000411754 PEG3Q9GZU2 1588 aa35.66■■■■□ 3.3
H19-201ENST00000411754 ATAD2BQ9ULI0 1458 aa35.6■■■■□ 3.29
H19-201ENST00000411754 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
H19-201ENST00000411754 CC2D2AQ9P2K1 1620 aa35.51■■■■□ 3.28
H19-201ENST00000411754 TOP2AP11388 1531 aaKnown RBP35.44■■■■□ 3.26
H19-201ENST00000411754 NCAPD3P42695 1498 aa35.35■■■■□ 3.25
H19-201ENST00000411754 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
H19-201ENST00000411754 HMGXB3Q12766 1538 aa35.28■■■■□ 3.24
H19-201ENST00000411754 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
H19-201ENST00000411754 DNAJC5BQ9UF47 199 aa35.08■■■■□ 3.21
H19-201ENST00000411754 CFTRP13569 1480 aa34.45■■■■□ 3.11
H19-201ENST00000411754 CHIC1Q5VXU3 224 aa34.41■■■■□ 3.1
H19-201ENST00000411754 CADPSQ9ULU8 1353 aa34.41■■■■□ 3.1
H19-201ENST00000411754 NESP48681 1621 aa34.33■■■■□ 3.09
H19-201ENST00000411754 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
H19-201ENST00000411754 ABCC8Q09428 1581 aa34.24■■■■□ 3.07
H19-201ENST00000411754 LAMC3Q9Y6N6 1575 aa34.24■■■■□ 3.07
H19-201ENST00000411754 FANCD2Q9BXW9 1451 aa34.04■■■■□ 3.04
H19-201ENST00000411754 TRIM41Q8WV44 630 aa34.01■■■■□ 3.04
H19-201ENST00000411754 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
H19-201ENST00000411754 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
H19-201ENST00000411754 SYNJ1O43426 1573 aa33.95■■■■□ 3.02
H19-201ENST00000411754 PDS5BQ9NTI5 1447 aa33.94■■■■□ 3.02
H19-201ENST00000411754 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
H19-201ENST00000411754 CUX1P39880 1505 aa33.86■■■■□ 3.01
H19-201ENST00000411754 TOP2BQ02880 1626 aa33.82■■■■□ 3
H19-201ENST00000411754 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
H19-201ENST00000411754 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
H19-201ENST00000411754 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
H19-201ENST00000411754 TOPBP1Q92547 1522 aa33.65■■■□□ 2.98
H19-201ENST00000411754 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
H19-201ENST00000411754 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.96
H19-201ENST00000411754 FGD5Q6ZNL6 1462 aa33.54■■■□□ 2.96
H19-201ENST00000411754 THOC2Q8NI27 1593 aaKnown RBP33.48■■■□□ 2.95
H19-201ENST00000411754 SOGA1O94964 1423 aa33.47■■■□□ 2.95
H19-201ENST00000411754 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
H19-201ENST00000411754 WDR62O43379 1518 aa33.43■■■□□ 2.94
H19-201ENST00000411754 FAM9AQ8IZU1 332 aaPredicted RBP33.43■■■□□ 2.94
H19-201ENST00000411754 RUSC2Q8N2Y8 1516 aa33.42■■■□□ 2.94
H19-201ENST00000411754 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
H19-201ENST00000411754 CUX2O14529 1486 aa33.25■■■□□ 2.91
H19-201ENST00000411754 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
H19-201ENST00000411754 TARBP1Q13395 1621 aaKnown RBP33.22■■■□□ 2.91
H19-201ENST00000411754 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
H19-201ENST00000411754 EEA1Q15075 1411 aa33.21■■■□□ 2.91
H19-201ENST00000411754 KIF27Q86VH2 1401 aa33.15■■■□□ 2.9
H19-201ENST00000411754 CSRNP3Q8WYN3 585 aa33.12■■■□□ 2.89
H19-201ENST00000411754 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
H19-201ENST00000411754 IFT140Q96RY7 1462 aa33.08■■■□□ 2.89
H19-201ENST00000411754 TDRD9Q8NDG6 1382 aaKnown RBP33.04■■■□□ 2.88
H19-201ENST00000411754 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
H19-201ENST00000411754 EHMT2Q96KQ7 1210 aa32.99■■■□□ 2.87
H19-201ENST00000411754 ZNF608Q9ULD9 1512 aaPredicted RBP32.98■■■□□ 2.87
H19-201ENST00000411754 IGF1RP08069 1367 aa32.96■■■□□ 2.87
H19-201ENST00000411754 GAPVD1Q14C86 1478 aa32.93■■■□□ 2.86
H19-201ENST00000411754 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.86
H19-201ENST00000411754 KIF21BO75037 1637 aa32.89■■■□□ 2.86
H19-201ENST00000411754 PRXQ9BXM0 1461 aa32.86■■■□□ 2.85
H19-201ENST00000411754 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
H19-201ENST00000411754 EIF4G3O43432 1585 aaKnown RBP32.85■■■□□ 2.85
H19-201ENST00000411754 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
H19-201ENST00000411754 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
H19-201ENST00000411754 GOLGA3Q08378 1498 aa32.77■■■□□ 2.84
H19-201ENST00000411754 CARMIL1Q5VZK9 1371 aa32.76■■■□□ 2.83
H19-201ENST00000411754 CUL7Q14999 1698 aa32.74■■■□□ 2.83
H19-201ENST00000411754 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
H19-201ENST00000411754 UBTFP17480 764 aaKnown RBP32.63■■■□□ 2.81
H19-201ENST00000411754 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
H19-201ENST00000411754 SNAPC4Q5SXM2 1469 aa32.6■■■□□ 2.81
H19-201ENST00000411754 TNIKQ9UKE5 1360 aa32.59■■■□□ 2.81
H19-201ENST00000411754 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
H19-201ENST00000411754 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
H19-201ENST00000411754 SYNJ2O15056 1496 aa32.39■■■□□ 2.78
H19-201ENST00000411754 CEP162Q5TB80 1403 aa32.39■■■□□ 2.78
H19-201ENST00000411754 CTTNBP2Q8WZ74 1663 aa32.37■■■□□ 2.77
H19-201ENST00000411754 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
H19-201ENST00000411754 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
H19-201ENST00000411754 FBLN2P98095 1184 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms