Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.367e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-211ENST00000533368 534 ntTSL 212.69□□□□□ -0.387e-6■■■■□ 23.5
XRN2Q9H0D6 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.397e-7■■■■□ 23.5
XRN2Q9H0D6 TARS-213ENST00000513066 656 ntTSL 312.56□□□□□ -0.47e-6■■■■□ 23.5
XRN2Q9H0D6 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.497e-6■■■■□ 23.5
XRN2Q9H0D6 TPM4-207ENST00000588032 712 ntTSL 311.81□□□□□ -0.527e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-216ENST00000627006 171 ntTSL 5 BASIC11.59□□□□□ -0.557e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-218ENST00000494646 528 ntTSL 411.52□□□□□ -0.577e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-207ENST00000505012 608 ntTSL 411.1□□□□□ -0.637e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.652e-9■■■■□ 23.5
XRN2Q9H0D6 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC10.79□□□□□ -0.687e-6■■■■□ 23.5
XRN2Q9H0D6 CTH-203ENST00000411986 2044 ntTSL 2 BASIC10.63□□□□□ -0.717e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-211ENST00000463144 2296 ntTSL 510.46□□□□□ -0.747e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.762e-9■■■■□ 23.5
XRN2Q9H0D6 MELTF-AS1-203ENST00000424769 356 ntTSL 210.1□□□□□ -0.797e-6■■■■□ 23.5
XRN2Q9H0D6 HERPUD1-206ENST00000563343 567 ntTSL 49.89□□□□□ -0.832e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.867e-6■■■■□ 23.5
XRN2Q9H0D6 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC9.64□□□□□ -0.877e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-210ENST00000508361 2481 ntTSL 29.56□□□□□ -0.887e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-212ENST00000509731 2170 ntTSL 1 (best)9.42□□□□□ -0.97e-6■■■■□ 23.5
XRN2Q9H0D6 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.96□□□□□ -0.987e-6■■■■□ 23.5
XRN2Q9H0D6 HERPUD1-217ENST00000569429 562 ntTSL 48.84□□□□□ -0.992e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-202ENST00000455217 2523 ntTSL 2 BASIC8.82□□□□□ -17e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.027e-6■■■■□ 23.5
XRN2Q9H0D6 FNTA-213ENST00000533559 429 ntTSL 38.32□□□□□ -1.087e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-209ENST00000507716 2475 ntTSL 28.31□□□□□ -1.087e-6■■■■□ 23.5
XRN2Q9H0D6 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.127e-6■■■■□ 23.5
XRN2Q9H0D6 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.04□□□□□ -1.121e-6■■■■□ 23.5
XRN2Q9H0D6 URGCP-204ENST00000439702 592 ntTSL 47.86□□□□□ -1.152e-9■■■■□ 23.5
XRN2Q9H0D6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.67□□□□□ -1.181e-6■■■■□ 23.5
XRN2Q9H0D6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.321e-6■■■■□ 23.5
XRN2Q9H0D6 CTH-205ENST00000482383 598 ntTSL 26.71□□□□□ -1.347e-6■■■■□ 23.5
XRN2Q9H0D6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.18□□□□□ -1.421e-6■■■■□ 23.5
XRN2Q9H0D6 HERPUD1-207ENST00000563781 774 ntTSL 35.85□□□□□ -1.477e-6■■■■□ 23.5
XRN2Q9H0D6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.57e-6■■■■□ 23.5
XRN2Q9H0D6 HERPUD1-213ENST00000568358 751 ntTSL 55.6□□□□□ -1.517e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-214ENST00000514259 466 ntTSL 45.22□□□□□ -1.577e-6■■■■□ 23.5
XRN2Q9H0D6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.67e-6■■■■□ 23.5
XRN2Q9H0D6 HERPUD1-211ENST00000566550 511 ntTSL 23.4□□□□□ -1.872e-6■■■■□ 23.5
XRN2Q9H0D6 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.5□□□□□ -2.657e-6■■■■□ 23.5
XRN2Q9H0D6 TMEM259-208ENST00000592052 1637 nt28.15■■■□□ 2.19e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-210ENST00000592618 1877 ntTSL 526.02■■□□□ 1.769e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.139e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.829e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-211ENST00000593068 1965 ntTSL 519.06■□□□□ 0.649e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.04■□□□□ 0.649e-21■■■■□ 23.5
XRN2Q9H0D6 TMEM259-205ENST00000586704 2538 ntTSL 518.06■□□□□ 0.489e-21■■■■□ 23.5
XRN2Q9H0D6 CARM1-206ENST00000588947 468 ntTSL 536.48■■■■□ 3.432e-7■■■■□ 23.4
XRN2Q9H0D6 USP42-202ENST00000404008 1380 ntTSL 233.44■■■□□ 2.942e-7■■■■□ 23.4
XRN2Q9H0D6 USP42-204ENST00000451154 520 ntTSL 532.86■■■□□ 2.852e-7■■■■□ 23.4
XRN2Q9H0D6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.692e-7■■■■□ 23.4
XRN2Q9H0D6 C1orf122-203ENST00000419397 223 ntTSL 530.64■■■□□ 2.52e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.24■■■□□ 2.432e-7■■■■□ 23.4
XRN2Q9H0D6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.352e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.15■■■□□ 2.262e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-216ENST00000496861 1351 ntTSL 1 (best)28.74■■■□□ 2.192e-7■■■■□ 23.4
XRN2Q9H0D6 INPPL1-211ENST00000541544 530 ntTSL 228.27■■■□□ 2.122e-7■■■■□ 23.4
XRN2Q9H0D6 PUS1-210ENST00000544213 687 ntTSL 528.15■■■□□ 2.14e-19■■■■□ 23.4
XRN2Q9H0D6 USP42-205ENST00000465073 1490 ntTSL 527.75■■■□□ 2.032e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-205ENST00000589239 2122 ntTSL 227.39■■□□□ 1.982e-7■■■■□ 23.4
XRN2Q9H0D6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.81■■□□□ 1.882e-7■■■■□ 23.4
XRN2Q9H0D6 SPIRE2-209ENST00000566337 1369 ntTSL 526.71■■□□□ 1.872e-8■■■■□ 23.4
XRN2Q9H0D6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.05■■□□□ 1.762e-7■■■■□ 23.4
XRN2Q9H0D6 PCGF5-203ENST00000496708 811 ntTSL 525.79■■□□□ 1.722e-7■■■■□ 23.4
XRN2Q9H0D6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.672e-7■■■■□ 23.4
XRN2Q9H0D6 SERINC5-206ENST00000632581 1573 ntTSL 225.44■■□□□ 1.662e-7■■■■□ 23.4
XRN2Q9H0D6 SERINC5-204ENST00000512972 1627 ntTSL 225.27■■□□□ 1.642e-7■■■■□ 23.4
XRN2Q9H0D6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.16■■□□□ 1.462e-7■■■■□ 23.4
XRN2Q9H0D6 PHF13-202ENST00000495385 798 ntTSL 323.75■■□□□ 1.392e-7■■■■□ 23.4
XRN2Q9H0D6 CARD10-210ENST00000494166 560 ntTSL 523.57■■□□□ 1.362e-7■■■■□ 23.4
XRN2Q9H0D6 CARD10-207ENST00000476871 583 ntTSL 423.57■■□□□ 1.362e-7■■■■□ 23.4
XRN2Q9H0D6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.53■■□□□ 1.362e-7■■■■□ 23.4
XRN2Q9H0D6 GIGYF1-202ENST00000464111 656 ntTSL 323.46■■□□□ 1.352e-7■■■■□ 23.4
XRN2Q9H0D6 PRKCZ-215ENST00000479263 1747 ntTSL 223.27■■□□□ 1.322e-7■■■■□ 23.4
XRN2Q9H0D6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.312e-7■■■■□ 23.4
XRN2Q9H0D6 CTBP1-211ENST00000511907 900 ntTSL 323.17■■□□□ 1.32e-7■■■■□ 23.4
XRN2Q9H0D6 TM6SF2-203ENST00000586107 528 ntTSL 323.12■■□□□ 1.292e-7■■■■□ 23.4
XRN2Q9H0D6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.03■■□□□ 1.282e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-203ENST00000534950 582 ntTSL 322.23■■□□□ 1.152e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-212ENST00000548174 584 ntTSL 321.65■■□□□ 1.062e-7■■■■□ 23.4
XRN2Q9H0D6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.53■■□□□ 1.043e-25■■■■□ 23.4
XRN2Q9H0D6 FXYD2-208ENST00000534383 991 ntTSL 321.31■■□□□ 12e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-201ENST00000306026 1905 ntTSL 221.31■■□□□ 12e-7■■■■□ 23.4
XRN2Q9H0D6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 12e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-212ENST00000526758 594 ntTSL 421.23■□□□□ 0.992e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.94■□□□□ 0.942e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD2-207ENST00000533281 375 ntTSL 220.92■□□□□ 0.942e-7■■■■□ 23.4
XRN2Q9H0D6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.9■□□□□ 0.941e-11■■■■□ 23.4
XRN2Q9H0D6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.92e-7■■■■□ 23.4
XRN2Q9H0D6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.92e-7■■■■□ 23.4
XRN2Q9H0D6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.55■□□□□ 0.882e-7■■■■□ 23.4
XRN2Q9H0D6 TMEM37-204ENST00000465296 820 ntTSL 320.44■□□□□ 0.862e-7■■■■□ 23.4
XRN2Q9H0D6 BAIAP2L1-202ENST00000462558 1250 ntTSL 1 (best)20.4■□□□□ 0.862e-7■■■■□ 23.4
XRN2Q9H0D6 TRIM47-203ENST00000586495 605 ntTSL 220.39■□□□□ 0.852e-7■■■■□ 23.4
XRN2Q9H0D6 NELFA-211ENST00000458616 792 ntTSL 320.37■□□□□ 0.852e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-202ENST00000586913 440 ntTSL 320.27■□□□□ 0.842e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.22■□□□□ 0.832e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.2■□□□□ 0.822e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.792e-7■■■■□ 23.4
XRN2Q9H0D6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.84■□□□□ 0.772e-7■■■■□ 23.4
Retrieved 100 of 21,068 protein–RNA pairs in 195.7 ms