RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 NISCHQ9Y2I1 1504 aa48.11■■■■■ 5.29
EXOSC4-202ENST00000525936 CCDC180Q9P1Z9 1646 aa42.7■■■■■ 4.43
EXOSC4-202ENST00000525936 ABCC9O60706 1549 aa41.71■■■■■ 4.27
EXOSC4-202ENST00000525936 NACADO15069 1562 aa40.16■■■■■ 4.02
EXOSC4-202ENST00000525936 RB1CC1Q8TDY2 1594 aa40.16■■■■■ 4.02
EXOSC4-202ENST00000525936 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
EXOSC4-202ENST00000525936 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4
EXOSC4-202ENST00000525936 MYO15BQ96JP2 1530 aa40.01■■■■□ 3.99
EXOSC4-202ENST00000525936 DCAF1Q9Y4B6 1507 aa39.85■■■■□ 3.97
EXOSC4-202ENST00000525936 UNC13AQ9UPW8 1703 aa39.24■■■■□ 3.87
EXOSC4-202ENST00000525936 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
EXOSC4-202ENST00000525936 BICRAQ9NZM4 1560 aa39.02■■■■□ 3.84
EXOSC4-202ENST00000525936 SCRIBQ14160 1630 aa38.91■■■■□ 3.82
EXOSC4-202ENST00000525936 SHROOM4Q9ULL8 1493 aa38.6■■■■□ 3.77
EXOSC4-202ENST00000525936 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
EXOSC4-202ENST00000525936 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
EXOSC4-202ENST00000525936 CC2D2AQ9P2K1 1620 aa37.75■■■■□ 3.63
EXOSC4-202ENST00000525936 CECR2Q9BXF3 1484 aa37.5■■■■□ 3.59
EXOSC4-202ENST00000525936 SMARCA4P51532 1647 aa37.28■■■■□ 3.56
EXOSC4-202ENST00000525936 BAZ1AQ9NRL2 1556 aaPredicted RBP37.24■■■■□ 3.55
EXOSC4-202ENST00000525936 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
EXOSC4-202ENST00000525936 ATAD2BQ9ULI0 1458 aa37.1■■■■□ 3.53
EXOSC4-202ENST00000525936 MROH2BQ7Z745 1585 aa37.06■■■■□ 3.52
EXOSC4-202ENST00000525936 SMARCA2P51531 1590 aa37.02■■■■□ 3.52
EXOSC4-202ENST00000525936 PEG3Q9GZU2 1588 aa36.98■■■■□ 3.51
EXOSC4-202ENST00000525936 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
EXOSC4-202ENST00000525936 BAZ1BQ9UIG0 1483 aaKnown RBP36.74■■■■□ 3.47
EXOSC4-202ENST00000525936 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
EXOSC4-202ENST00000525936 WIZO95785 1651 aa36.63■■■■□ 3.45
EXOSC4-202ENST00000525936 TOP2AP11388 1531 aaKnown RBP36.25■■■■□ 3.39
EXOSC4-202ENST00000525936 NESP48681 1621 aa36.14■■■■□ 3.38
EXOSC4-202ENST00000525936 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
EXOSC4-202ENST00000525936 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.35
EXOSC4-202ENST00000525936 ERCC6Q03468 1493 aa35.91■■■■□ 3.34
EXOSC4-202ENST00000525936 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
EXOSC4-202ENST00000525936 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
EXOSC4-202ENST00000525936 CFTRP13569 1480 aa35.81■■■■□ 3.32
EXOSC4-202ENST00000525936 SUPT5HO00267 1087 aaKnown RBP35.68■■■■□ 3.3
EXOSC4-202ENST00000525936 KIF21AQ7Z4S6 1674 aa35.67■■■■□ 3.3
EXOSC4-202ENST00000525936 CUX2O14529 1486 aa35.59■■■■□ 3.29
EXOSC4-202ENST00000525936 THOC2Q8NI27 1593 aaKnown RBP35.57■■■■□ 3.28
EXOSC4-202ENST00000525936 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
EXOSC4-202ENST00000525936 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
EXOSC4-202ENST00000525936 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
EXOSC4-202ENST00000525936 MRC2Q9UBG0 1479 aa35.43■■■■□ 3.26
EXOSC4-202ENST00000525936 WDR62O43379 1518 aa35.33■■■■□ 3.25
EXOSC4-202ENST00000525936 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
EXOSC4-202ENST00000525936 ABCC8Q09428 1581 aa35■■■■□ 3.19
EXOSC4-202ENST00000525936 TOPBP1Q92547 1522 aa34.99■■■■□ 3.19
EXOSC4-202ENST00000525936 DNMBPQ6XZF7 1577 aa34.94■■■■□ 3.18
EXOSC4-202ENST00000525936 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
EXOSC4-202ENST00000525936 CUX1P39880 1505 aa34.76■■■■□ 3.15
EXOSC4-202ENST00000525936 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
EXOSC4-202ENST00000525936 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
EXOSC4-202ENST00000525936 ZNF608Q9ULD9 1512 aaPredicted RBP34.61■■■■□ 3.13
EXOSC4-202ENST00000525936 FGD5Q6ZNL6 1462 aa34.6■■■■□ 3.13
EXOSC4-202ENST00000525936 SOGA1O94964 1423 aa34.56■■■■□ 3.12
EXOSC4-202ENST00000525936 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
EXOSC4-202ENST00000525936 WRNQ14191 1432 aaPredicted RBP eCLIP34.54■■■■□ 3.12
EXOSC4-202ENST00000525936 DNAJC5Q9H3Z4 198 aa34.51■■■■□ 3.12
EXOSC4-202ENST00000525936 TOP2BQ02880 1626 aa34.47■■■■□ 3.11
EXOSC4-202ENST00000525936 SYNJ1O43426 1573 aa34.45■■■■□ 3.1
EXOSC4-202ENST00000525936 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
EXOSC4-202ENST00000525936 EIF4G3O43432 1585 aaKnown RBP34.42■■■■□ 3.1
EXOSC4-202ENST00000525936 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.15e-8■■■■■ 28.9
EXOSC4-202ENST00000525936 TDRD9Q8NDG6 1382 aaKnown RBP34.36■■■■□ 3.09
EXOSC4-202ENST00000525936 WDR97A6NE52 1622 aa34.34■■■■□ 3.09
EXOSC4-202ENST00000525936 ABCA10Q8WWZ4 1543 aa34.31■■■■□ 3.08
EXOSC4-202ENST00000525936 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
EXOSC4-202ENST00000525936 OSCARQ8IYS5 282 aa34.15■■■■□ 3.06
EXOSC4-202ENST00000525936 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
EXOSC4-202ENST00000525936 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
EXOSC4-202ENST00000525936 SNAPC4Q5SXM2 1469 aa34.07■■■■□ 3.04
EXOSC4-202ENST00000525936 MAGI1Q96QZ7 1491 aaPredicted RBP34.06■■■■□ 3.04
EXOSC4-202ENST00000525936 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
EXOSC4-202ENST00000525936 CHD1O14646 1710 aa33.96■■■■□ 3.03
EXOSC4-202ENST00000525936 SYNJ2O15056 1496 aa33.93■■■■□ 3.02
EXOSC4-202ENST00000525936 FBLN2P98095 1184 aa33.92■■■■□ 3.02
EXOSC4-202ENST00000525936 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
EXOSC4-202ENST00000525936 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
EXOSC4-202ENST00000525936 KIF27Q86VH2 1401 aa33.81■■■■□ 3
EXOSC4-202ENST00000525936 ADAMTS12P58397 1594 aa33.78■■■■□ 3
EXOSC4-202ENST00000525936 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
EXOSC4-202ENST00000525936 IGF1RP08069 1367 aa33.73■■■□□ 2.99
EXOSC4-202ENST00000525936 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
EXOSC4-202ENST00000525936 GRIN2AQ12879 1464 aa33.7■■■□□ 2.99
EXOSC4-202ENST00000525936 CLASP1Q7Z460 1538 aa33.67■■■□□ 2.98
EXOSC4-202ENST00000525936 NUP160Q12769 1436 aa33.6■■■□□ 2.97
EXOSC4-202ENST00000525936 ARHGEF11O15085 1522 aa33.55■■■□□ 2.96
EXOSC4-202ENST00000525936 CUL7Q14999 1698 aa33.55■■■□□ 2.96
EXOSC4-202ENST00000525936 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
EXOSC4-202ENST00000525936 RIMBP3CA6NJZ7 1639 aa33.54■■■□□ 2.96
EXOSC4-202ENST00000525936 RIMBP3BA6NNM3 1639 aa33.54■■■□□ 2.96
EXOSC4-202ENST00000525936 RIMBP3Q9UFD9 1639 aa33.54■■■□□ 2.96
EXOSC4-202ENST00000525936 CEP170Q5SW79 1584 aa33.53■■■□□ 2.96
EXOSC4-202ENST00000525936 CARMIL1Q5VZK9 1371 aa33.49■■■□□ 2.95
EXOSC4-202ENST00000525936 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
EXOSC4-202ENST00000525936 SHROOM2Q13796 1616 aa33.31■■■□□ 2.92
EXOSC4-202ENST00000525936 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
EXOSC4-202ENST00000525936 RAPGEF2Q9Y4G8 1499 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms