RNA–Protein interactions for RNA: ENST00000346806.2

CTH-201, Transcript of cystathionine gamma-lyase, humanhuman

TSL 1 (best) BASIC

Gene CTH, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTH-201ENST00000346806 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
CTH-201ENST00000346806 ABCC9O60706 1549 aa18.21■□□□□ 0.51
CTH-201ENST00000346806 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
CTH-201ENST00000346806 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
CTH-201ENST00000346806 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
CTH-201ENST00000346806 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
CTH-201ENST00000346806 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
CTH-201ENST00000346806 NACADO15069 1562 aa17■□□□□ 0.31
CTH-201ENST00000346806 MYO15BQ96JP2 1530 aa16.92■□□□□ 0.3
CTH-201ENST00000346806 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
CTH-201ENST00000346806 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTH-201ENST00000346806 DNAJC5Q9H3Z4 198 aa16.8■□□□□ 0.28
CTH-201ENST00000346806 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
CTH-201ENST00000346806 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
CTH-201ENST00000346806 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
CTH-201ENST00000346806 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
CTH-201ENST00000346806 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
CTH-201ENST00000346806 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
CTH-201ENST00000346806 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
CTH-201ENST00000346806 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
CTH-201ENST00000346806 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
CTH-201ENST00000346806 CUX2O14529 1486 aa16.02■□□□□ 0.15
CTH-201ENST00000346806 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
CTH-201ENST00000346806 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
CTH-201ENST00000346806 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
CTH-201ENST00000346806 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
CTH-201ENST00000346806 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
CTH-201ENST00000346806 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
CTH-201ENST00000346806 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
CTH-201ENST00000346806 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
CTH-201ENST00000346806 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
CTH-201ENST00000346806 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
CTH-201ENST00000346806 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
CTH-201ENST00000346806 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
CTH-201ENST00000346806 WIZO95785 1651 aa15.43■□□□□ 0.06
CTH-201ENST00000346806 NESP48681 1621 aa15.41■□□□□ 0.06
CTH-201ENST00000346806 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
CTH-201ENST00000346806 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
CTH-201ENST00000346806 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
CTH-201ENST00000346806 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
CTH-201ENST00000346806 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
CTH-201ENST00000346806 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
CTH-201ENST00000346806 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
CTH-201ENST00000346806 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
CTH-201ENST00000346806 CFTRP13569 1480 aa15.12■□□□□ 0.01
CTH-201ENST00000346806 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
CTH-201ENST00000346806 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
CTH-201ENST00000346806 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
CTH-201ENST00000346806 WDR62O43379 1518 aa15.05■□□□□ -0
CTH-201ENST00000346806 PRDM2Q13029 1718 aa15.05■□□□□ -0
CTH-201ENST00000346806 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
CTH-201ENST00000346806 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
CTH-201ENST00000346806 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
CTH-201ENST00000346806 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
CTH-201ENST00000346806 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
CTH-201ENST00000346806 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
CTH-201ENST00000346806 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
CTH-201ENST00000346806 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
CTH-201ENST00000346806 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
CTH-201ENST00000346806 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
CTH-201ENST00000346806 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
CTH-201ENST00000346806 ABCC8Q09428 1581 aa14.75□□□□□ -0.05
CTH-201ENST00000346806 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
CTH-201ENST00000346806 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
CTH-201ENST00000346806 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
CTH-201ENST00000346806 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
CTH-201ENST00000346806 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
CTH-201ENST00000346806 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
CTH-201ENST00000346806 CUX1P39880 1505 aa14.65□□□□□ -0.06
CTH-201ENST00000346806 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
CTH-201ENST00000346806 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
CTH-201ENST00000346806 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
CTH-201ENST00000346806 CHD1O14646 1710 aa14.56□□□□□ -0.08
CTH-201ENST00000346806 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
CTH-201ENST00000346806 SOGA1O94964 1423 aa14.53□□□□□ -0.08
CTH-201ENST00000346806 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
CTH-201ENST00000346806 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
CTH-201ENST00000346806 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
CTH-201ENST00000346806 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
CTH-201ENST00000346806 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
CTH-201ENST00000346806 FBLN2P98095 1184 aa14.48□□□□□ -0.09
CTH-201ENST00000346806 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
CTH-201ENST00000346806 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
CTH-201ENST00000346806 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
CTH-201ENST00000346806 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
CTH-201ENST00000346806 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
CTH-201ENST00000346806 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
CTH-201ENST00000346806 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
CTH-201ENST00000346806 MAGI1Q96QZ7 1491 aaPredicted RBP14.39□□□□□ -0.11
CTH-201ENST00000346806 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
CTH-201ENST00000346806 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
CTH-201ENST00000346806 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
CTH-201ENST00000346806 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
CTH-201ENST00000346806 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
CTH-201ENST00000346806 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
CTH-201ENST00000346806 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
CTH-201ENST00000346806 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
CTH-201ENST00000346806 NUP160Q12769 1436 aa14.21□□□□□ -0.13
CTH-201ENST00000346806 CEP170Q5SW79 1584 aa14.19□□□□□ -0.14
CTH-201ENST00000346806 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms