RNA–Protein interactions for RNA: ENST00000548174.5

LARP4-212, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 3

Gene LARP4, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-212ENST00000548174 NISCHQ9Y2I1 1504 aa44.88■■■■■ 4.78
LARP4-212ENST00000548174 CCDC180Q9P1Z9 1646 aa40.24■■■■■ 4.03
LARP4-212ENST00000548174 ABCC9O60706 1549 aa39.73■■■■□ 3.95
LARP4-212ENST00000548174 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
LARP4-212ENST00000548174 NACADO15069 1562 aa37.91■■■■□ 3.66
LARP4-212ENST00000548174 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
LARP4-212ENST00000548174 DCAF8L2P0C7V8 631 aa37.51■■■■□ 3.6
LARP4-212ENST00000548174 ZCCHC6Q5VYS8 1495 aaKnown RBP37.3■■■■□ 3.56
LARP4-212ENST00000548174 UNC13AQ9UPW8 1703 aa37.23■■■■□ 3.55
LARP4-212ENST00000548174 DCAF1Q9Y4B6 1507 aa37.18■■■■□ 3.54
LARP4-212ENST00000548174 PABPN1Q86U42 306 aaKnown RBP eCLIP36.95■■■■□ 3.51
LARP4-212ENST00000548174 BICRAQ9NZM4 1560 aa36.94■■■■□ 3.5
LARP4-212ENST00000548174 DNAJC5BQ9UF47 199 aa36.91■■■■□ 3.5
LARP4-212ENST00000548174 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
LARP4-212ENST00000548174 SCRIBQ14160 1630 aa36.55■■■■□ 3.44
LARP4-212ENST00000548174 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
LARP4-212ENST00000548174 CC2D2AQ9P2K1 1620 aa35.97■■■■□ 3.35
LARP4-212ENST00000548174 CECR2Q9BXF3 1484 aa35.79■■■■□ 3.32
LARP4-212ENST00000548174 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
LARP4-212ENST00000548174 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
LARP4-212ENST00000548174 ATAD2BQ9ULI0 1458 aa34.87■■■■□ 3.17
LARP4-212ENST00000548174 SMARCA2P51531 1590 aa34.85■■■■□ 3.17
LARP4-212ENST00000548174 BAZ1AQ9NRL2 1556 aaPredicted RBP34.84■■■■□ 3.17
LARP4-212ENST00000548174 HMGXB3Q12766 1538 aa34.79■■■■□ 3.16
LARP4-212ENST00000548174 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
LARP4-212ENST00000548174 BAZ1BQ9UIG0 1483 aaKnown RBP34.56■■■■□ 3.12
LARP4-212ENST00000548174 MROH2BQ7Z745 1585 aa34.54■■■■□ 3.12
LARP4-212ENST00000548174 ERCC6Q03468 1493 aa34.3■■■■□ 3.08
LARP4-212ENST00000548174 NESP48681 1621 aa34.22■■■■□ 3.07
LARP4-212ENST00000548174 CUX2O14529 1486 aa34.22■■■■□ 3.07
LARP4-212ENST00000548174 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
LARP4-212ENST00000548174 WIZO95785 1651 aa34.15■■■■□ 3.06
LARP4-212ENST00000548174 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.02
LARP4-212ENST00000548174 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
LARP4-212ENST00000548174 PDS5BQ9NTI5 1447 aa33.89■■■■□ 3.02
LARP4-212ENST00000548174 CADPSQ9ULU8 1353 aa33.87■■■■□ 3.01
LARP4-212ENST00000548174 KIF21AQ7Z4S6 1674 aa33.87■■■■□ 3.01
LARP4-212ENST00000548174 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
LARP4-212ENST00000548174 DNAJC5Q9H3Z4 198 aa33.72■■■□□ 2.99
LARP4-212ENST00000548174 CFTRP13569 1480 aa33.59■■■□□ 2.97
LARP4-212ENST00000548174 MRC2Q9UBG0 1479 aa33.59■■■□□ 2.97
LARP4-212ENST00000548174 WDR62O43379 1518 aa33.53■■■□□ 2.96
LARP4-212ENST00000548174 CEP164Q9UPV0 1460 aa33.52■■■□□ 2.96
LARP4-212ENST00000548174 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
LARP4-212ENST00000548174 PRDM2Q13029 1718 aa33.39■■■□□ 2.94
LARP4-212ENST00000548174 CCDC88BA6NC98 1476 aa33.34■■■□□ 2.93
LARP4-212ENST00000548174 URB2Q14146 1524 aaKnown RBP33.2■■■□□ 2.91
LARP4-212ENST00000548174 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
LARP4-212ENST00000548174 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
LARP4-212ENST00000548174 DNMBPQ6XZF7 1577 aa32.86■■■□□ 2.85
LARP4-212ENST00000548174 IFT140Q96RY7 1462 aa32.85■■■□□ 2.85
LARP4-212ENST00000548174 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
LARP4-212ENST00000548174 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
LARP4-212ENST00000548174 EIF4G3O43432 1585 aaKnown RBP32.62■■■□□ 2.81
LARP4-212ENST00000548174 POLA1P09884 1462 aaPredicted RBP32.6■■■□□ 2.81
LARP4-212ENST00000548174 OSCARQ8IYS5 282 aa32.59■■■□□ 2.81
LARP4-212ENST00000548174 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
LARP4-212ENST00000548174 CUX1P39880 1505 aa32.45■■■□□ 2.78
LARP4-212ENST00000548174 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.784e-8■■■■■ 32.5
LARP4-212ENST00000548174 FGD5Q6ZNL6 1462 aa32.42■■■□□ 2.78
LARP4-212ENST00000548174 SOGA1O94964 1423 aa32.41■■■□□ 2.78
LARP4-212ENST00000548174 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
LARP4-212ENST00000548174 RAD54L2Q9Y4B4 1467 aa32.4■■■□□ 2.78
LARP4-212ENST00000548174 CHD1O14646 1710 aa32.31■■■□□ 2.76
LARP4-212ENST00000548174 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
LARP4-212ENST00000548174 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
LARP4-212ENST00000548174 RIMBP3CA6NJZ7 1639 aa32.21■■■□□ 2.75
LARP4-212ENST00000548174 RIMBP3BA6NNM3 1639 aa32.21■■■□□ 2.75
LARP4-212ENST00000548174 RIMBP3Q9UFD9 1639 aa32.21■■■□□ 2.75
LARP4-212ENST00000548174 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
LARP4-212ENST00000548174 GRIN2BQ13224 1484 aa32.14■■■□□ 2.74
LARP4-212ENST00000548174 MAGI1Q96QZ7 1491 aaPredicted RBP32.14■■■□□ 2.74
LARP4-212ENST00000548174 ARHGEF11O15085 1522 aa32.14■■■□□ 2.74
LARP4-212ENST00000548174 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
LARP4-212ENST00000548174 BIVM-ERCC5R4GMW8 1640 aa32.09■■■□□ 2.73
LARP4-212ENST00000548174 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
LARP4-212ENST00000548174 FBLN2P98095 1184 aa32.07■■■□□ 2.72
LARP4-212ENST00000548174 TOP2BQ02880 1626 aa32.07■■■□□ 2.72
LARP4-212ENST00000548174 ABCA5Q8WWZ7 1642 aa32.07■■■□□ 2.72
LARP4-212ENST00000548174 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
LARP4-212ENST00000548174 WRNQ14191 1432 aaPredicted RBP eCLIP32.03■■■□□ 2.72
LARP4-212ENST00000548174 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
LARP4-212ENST00000548174 SYNJ1O43426 1573 aa32■■■□□ 2.71
LARP4-212ENST00000548174 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
LARP4-212ENST00000548174 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
LARP4-212ENST00000548174 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
LARP4-212ENST00000548174 ADAMTS12P58397 1594 aa31.78■■■□□ 2.68
LARP4-212ENST00000548174 CYB5RLQ6IPT4 315 aa31.75■■■□□ 2.67
LARP4-212ENST00000548174 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
LARP4-212ENST00000548174 GRIN2AQ12879 1464 aa31.72■■■□□ 2.67
LARP4-212ENST00000548174 FHAD1B1AJZ9 1412 aa31.67■■■□□ 2.66
LARP4-212ENST00000548174 NUP160Q12769 1436 aa31.63■■■□□ 2.65
LARP4-212ENST00000548174 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
LARP4-212ENST00000548174 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
LARP4-212ENST00000548174 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
LARP4-212ENST00000548174 ERCC6L2Q5T890 1561 aa31.4■■■□□ 2.62
LARP4-212ENST00000548174 CUL7Q14999 1698 aa31.36■■■□□ 2.61
LARP4-212ENST00000548174 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
LARP4-212ENST00000548174 IGF1RP08069 1367 aa31.31■■■□□ 2.6
LARP4-212ENST00000548174 TRHP20396 242 aaPredicted RBP31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms