RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
RFX1-202ENST00000586913 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
RFX1-202ENST00000586913 ABCC9O60706 1549 aa36.85■■■■□ 3.49
RFX1-202ENST00000586913 RB1CC1Q8TDY2 1594 aa35.41■■■■□ 3.26
RFX1-202ENST00000586913 NACADO15069 1562 aa35.35■■■■□ 3.25
RFX1-202ENST00000586913 DCAF8L2P0C7V8 631 aa35.17■■■■□ 3.22
RFX1-202ENST00000586913 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
RFX1-202ENST00000586913 ZCCHC6Q5VYS8 1495 aaKnown RBP35.02■■■■□ 3.2
RFX1-202ENST00000586913 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
RFX1-202ENST00000586913 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
RFX1-202ENST00000586913 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.1
RFX1-202ENST00000586913 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.09
RFX1-202ENST00000586913 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
RFX1-202ENST00000586913 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
RFX1-202ENST00000586913 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
RFX1-202ENST00000586913 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
RFX1-202ENST00000586913 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
RFX1-202ENST00000586913 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
RFX1-202ENST00000586913 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
RFX1-202ENST00000586913 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
RFX1-202ENST00000586913 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
RFX1-202ENST00000586913 ATAD2BQ9ULI0 1458 aa32.6■■■□□ 2.81
RFX1-202ENST00000586913 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
RFX1-202ENST00000586913 HMGXB3Q12766 1538 aa32.43■■■□□ 2.78
RFX1-202ENST00000586913 PEG3Q9GZU2 1588 aa32.43■■■□□ 2.78
RFX1-202ENST00000586913 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
RFX1-202ENST00000586913 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
RFX1-202ENST00000586913 WIZO95785 1651 aa32■■■□□ 2.71
RFX1-202ENST00000586913 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
RFX1-202ENST00000586913 NESP48681 1621 aa31.82■■■□□ 2.68
RFX1-202ENST00000586913 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
RFX1-202ENST00000586913 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
RFX1-202ENST00000586913 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
RFX1-202ENST00000586913 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
RFX1-202ENST00000586913 CUX2O14529 1486 aa31.6■■■□□ 2.65
RFX1-202ENST00000586913 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
RFX1-202ENST00000586913 CFTRP13569 1480 aa31.43■■■□□ 2.62
RFX1-202ENST00000586913 THOC2Q8NI27 1593 aaKnown RBP31.41■■■□□ 2.62
RFX1-202ENST00000586913 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
RFX1-202ENST00000586913 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
RFX1-202ENST00000586913 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
RFX1-202ENST00000586913 MRC2Q9UBG0 1479 aa31.25■■■□□ 2.59
RFX1-202ENST00000586913 CEP164Q9UPV0 1460 aa31.24■■■□□ 2.59
RFX1-202ENST00000586913 WDR62O43379 1518 aa31.16■■■□□ 2.58
RFX1-202ENST00000586913 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
RFX1-202ENST00000586913 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
RFX1-202ENST00000586913 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
RFX1-202ENST00000586913 DNAJC5Q9H3Z4 198 aa30.9■■■□□ 2.54
RFX1-202ENST00000586913 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
RFX1-202ENST00000586913 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
RFX1-202ENST00000586913 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
RFX1-202ENST00000586913 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
RFX1-202ENST00000586913 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
RFX1-202ENST00000586913 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
RFX1-202ENST00000586913 CUX1P39880 1505 aa30.41■■■□□ 2.46
RFX1-202ENST00000586913 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
RFX1-202ENST00000586913 SOGA1O94964 1423 aa30.35■■■□□ 2.45
RFX1-202ENST00000586913 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
RFX1-202ENST00000586913 EIF4G3O43432 1585 aaKnown RBP30.31■■■□□ 2.44
RFX1-202ENST00000586913 RAD54L2Q9Y4B4 1467 aa30.3■■■□□ 2.44
RFX1-202ENST00000586913 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
RFX1-202ENST00000586913 AQRO60306 1485 aaKnown RBP eCLIP30.25■■■□□ 2.43
RFX1-202ENST00000586913 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
RFX1-202ENST00000586913 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
RFX1-202ENST00000586913 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.42
RFX1-202ENST00000586913 TOP2BQ02880 1626 aa30.1■■■□□ 2.41
RFX1-202ENST00000586913 BIVM-ERCC5R4GMW8 1640 aa30.09■■■□□ 2.41
RFX1-202ENST00000586913 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
RFX1-202ENST00000586913 SYNJ1O43426 1573 aa30.04■■■□□ 2.4
RFX1-202ENST00000586913 GRIN2BQ13224 1484 aa30.02■■■□□ 2.4
RFX1-202ENST00000586913 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
RFX1-202ENST00000586913 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
RFX1-202ENST00000586913 SNAPC4Q5SXM2 1469 aa29.97■■■□□ 2.39
RFX1-202ENST00000586913 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
RFX1-202ENST00000586913 CHD1O14646 1710 aa29.93■■■□□ 2.38
RFX1-202ENST00000586913 FBLN2P98095 1184 aa29.91■■■□□ 2.38
RFX1-202ENST00000586913 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
RFX1-202ENST00000586913 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
RFX1-202ENST00000586913 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
RFX1-202ENST00000586913 ARHGEF11O15085 1522 aa29.72■■■□□ 2.35
RFX1-202ENST00000586913 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
RFX1-202ENST00000586913 RIMBP3CA6NJZ7 1639 aa29.71■■■□□ 2.35
RFX1-202ENST00000586913 RIMBP3BA6NNM3 1639 aa29.71■■■□□ 2.35
RFX1-202ENST00000586913 RIMBP3Q9UFD9 1639 aa29.71■■■□□ 2.35
RFX1-202ENST00000586913 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
RFX1-202ENST00000586913 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
RFX1-202ENST00000586913 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
RFX1-202ENST00000586913 FHAD1B1AJZ9 1412 aa29.66■■■□□ 2.34
RFX1-202ENST00000586913 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
RFX1-202ENST00000586913 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
RFX1-202ENST00000586913 NUP160Q12769 1436 aa29.54■■■□□ 2.32
RFX1-202ENST00000586913 IGF1RP08069 1367 aa29.48■■■□□ 2.31
RFX1-202ENST00000586913 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
RFX1-202ENST00000586913 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
RFX1-202ENST00000586913 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.31
RFX1-202ENST00000586913 CUL7Q14999 1698 aa29.37■■■□□ 2.29
RFX1-202ENST00000586913 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
RFX1-202ENST00000586913 CARMIL1Q5VZK9 1371 aa29.28■■■□□ 2.28
RFX1-202ENST00000586913 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
RFX1-202ENST00000586913 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms