RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 NISCHQ9Y2I1 1504 aa41.96■■■■■ 4.31
TRIM47-203ENST00000586495 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
TRIM47-203ENST00000586495 ABCC9O60706 1549 aa37.27■■■■□ 3.56
TRIM47-203ENST00000586495 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
TRIM47-203ENST00000586495 NACADO15069 1562 aa35.45■■■■□ 3.27
TRIM47-203ENST00000586495 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
TRIM47-203ENST00000586495 MYO15BQ96JP2 1530 aa35.07■■■■□ 3.21
TRIM47-203ENST00000586495 ZCCHC6Q5VYS8 1495 aaKnown RBP34.83■■■■□ 3.17
TRIM47-203ENST00000586495 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
TRIM47-203ENST00000586495 UNC13AQ9UPW8 1703 aa34.72■■■■□ 3.15
TRIM47-203ENST00000586495 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
TRIM47-203ENST00000586495 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
TRIM47-203ENST00000586495 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
TRIM47-203ENST00000586495 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
TRIM47-203ENST00000586495 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
TRIM47-203ENST00000586495 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
TRIM47-203ENST00000586495 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
TRIM47-203ENST00000586495 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
TRIM47-203ENST00000586495 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
TRIM47-203ENST00000586495 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
TRIM47-203ENST00000586495 ATAD2BQ9ULI0 1458 aa32.65■■■□□ 2.82
TRIM47-203ENST00000586495 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
TRIM47-203ENST00000586495 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
TRIM47-203ENST00000586495 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
TRIM47-203ENST00000586495 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
TRIM47-203ENST00000586495 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
TRIM47-203ENST00000586495 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
TRIM47-203ENST00000586495 ERCC6Q03468 1493 aa32.21■■■□□ 2.75
TRIM47-203ENST00000586495 NESP48681 1621 aa32.08■■■□□ 2.73
TRIM47-203ENST00000586495 CUX2O14529 1486 aa32.06■■■□□ 2.72
TRIM47-203ENST00000586495 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
TRIM47-203ENST00000586495 WIZO95785 1651 aa31.92■■■□□ 2.7
TRIM47-203ENST00000586495 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
TRIM47-203ENST00000586495 RSF1Q96T23 1441 aaPredicted RBP31.77■■■□□ 2.68
TRIM47-203ENST00000586495 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
TRIM47-203ENST00000586495 DNAJC5Q9H3Z4 198 aa31.75■■■□□ 2.67
TRIM47-203ENST00000586495 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
TRIM47-203ENST00000586495 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
TRIM47-203ENST00000586495 TOP2AP11388 1531 aaKnown RBP31.58■■■□□ 2.65
TRIM47-203ENST00000586495 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
TRIM47-203ENST00000586495 CFTRP13569 1480 aa31.43■■■□□ 2.62
TRIM47-203ENST00000586495 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
TRIM47-203ENST00000586495 FANCD2Q9BXW9 1451 aa31.38■■■□□ 2.61
TRIM47-203ENST00000586495 WDR62O43379 1518 aa31.34■■■□□ 2.61
TRIM47-203ENST00000586495 CCDC88BA6NC98 1476 aa31.22■■■□□ 2.59
TRIM47-203ENST00000586495 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
TRIM47-203ENST00000586495 URB2Q14146 1524 aaKnown RBP31.07■■■□□ 2.56
TRIM47-203ENST00000586495 ABCC8Q09428 1581 aa30.82■■■□□ 2.52
TRIM47-203ENST00000586495 TOPBP1Q92547 1522 aa30.8■■■□□ 2.52
TRIM47-203ENST00000586495 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
TRIM47-203ENST00000586495 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
TRIM47-203ENST00000586495 OSCARQ8IYS5 282 aa30.69■■■□□ 2.5
TRIM47-203ENST00000586495 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
TRIM47-203ENST00000586495 SUPT5HO00267 1087 aaKnown RBP30.61■■■□□ 2.49
TRIM47-203ENST00000586495 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
TRIM47-203ENST00000586495 EIF4G3O43432 1585 aaKnown RBP30.47■■■□□ 2.47
TRIM47-203ENST00000586495 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
TRIM47-203ENST00000586495 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
TRIM47-203ENST00000586495 AQRO60306 1485 aaKnown RBP eCLIP30.42■■■□□ 2.462e-7■□□□□ 10.4
TRIM47-203ENST00000586495 SOGA1O94964 1423 aa30.41■■■□□ 2.46
TRIM47-203ENST00000586495 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
TRIM47-203ENST00000586495 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
TRIM47-203ENST00000586495 CUX1P39880 1505 aa30.34■■■□□ 2.45
TRIM47-203ENST00000586495 TDRD9Q8NDG6 1382 aaKnown RBP30.29■■■□□ 2.44
TRIM47-203ENST00000586495 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
TRIM47-203ENST00000586495 FBLN2P98095 1184 aa30.23■■■□□ 2.43
TRIM47-203ENST00000586495 CHD1O14646 1710 aa30.19■■■□□ 2.42
TRIM47-203ENST00000586495 RIMBP3CA6NJZ7 1639 aa30.15■■■□□ 2.42
TRIM47-203ENST00000586495 RIMBP3BA6NNM3 1639 aa30.15■■■□□ 2.42
TRIM47-203ENST00000586495 RIMBP3Q9UFD9 1639 aa30.15■■■□□ 2.42
TRIM47-203ENST00000586495 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
TRIM47-203ENST00000586495 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
TRIM47-203ENST00000586495 ARHGEF11O15085 1522 aa30.11■■■□□ 2.41
TRIM47-203ENST00000586495 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
TRIM47-203ENST00000586495 CHMP7Q8WUX9 453 aaPredicted RBP30.07■■■□□ 2.4
TRIM47-203ENST00000586495 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
TRIM47-203ENST00000586495 GAPVD1Q14C86 1478 aa30.03■■■□□ 2.4
TRIM47-203ENST00000586495 WRNQ14191 1432 aaPredicted RBP eCLIP30.01■■■□□ 2.39
TRIM47-203ENST00000586495 SYNJ2O15056 1496 aa29.97■■■□□ 2.39
TRIM47-203ENST00000586495 TOP2BQ02880 1626 aa29.95■■■□□ 2.38
TRIM47-203ENST00000586495 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
TRIM47-203ENST00000586495 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
TRIM47-203ENST00000586495 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
TRIM47-203ENST00000586495 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
TRIM47-203ENST00000586495 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
TRIM47-203ENST00000586495 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
TRIM47-203ENST00000586495 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
TRIM47-203ENST00000586495 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
TRIM47-203ENST00000586495 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
TRIM47-203ENST00000586495 FHAD1B1AJZ9 1412 aa29.68■■■□□ 2.34
TRIM47-203ENST00000586495 ERICH3Q5RHP9 1530 aa29.67■■■□□ 2.34
TRIM47-203ENST00000586495 NUP160Q12769 1436 aa29.59■■■□□ 2.33
TRIM47-203ENST00000586495 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
TRIM47-203ENST00000586495 CEP170Q5SW79 1584 aa29.54■■■□□ 2.32
TRIM47-203ENST00000586495 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
TRIM47-203ENST00000586495 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
TRIM47-203ENST00000586495 SHROOM2Q13796 1616 aa29.39■■■□□ 2.3
TRIM47-203ENST00000586495 IGF1RP08069 1367 aa29.37■■■□□ 2.29
TRIM47-203ENST00000586495 JPH4Q96JJ6 628 aa29.35■■■□□ 2.29
TRIM47-203ENST00000586495 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms