RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 NISCHQ9Y2I1 1504 aa41.99■■■■■ 4.31
NELFA-211ENST00000458616 ABCC9O60706 1549 aa37.65■■■■□ 3.62
NELFA-211ENST00000458616 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
NELFA-211ENST00000458616 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
NELFA-211ENST00000458616 NACADO15069 1562 aa35.54■■■■□ 3.28
NELFA-211ENST00000458616 DCAF8L2P0C7V8 631 aa35.47■■■■□ 3.27
NELFA-211ENST00000458616 DNAJC5BQ9UF47 199 aa35.47■■■■□ 3.27
NELFA-211ENST00000458616 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
NELFA-211ENST00000458616 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
NELFA-211ENST00000458616 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.18
NELFA-211ENST00000458616 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
NELFA-211ENST00000458616 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
NELFA-211ENST00000458616 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
NELFA-211ENST00000458616 SCRIBQ14160 1630 aa34.26■■■■□ 3.08
NELFA-211ENST00000458616 SHROOM4Q9ULL8 1493 aa34.22■■■■□ 3.07
NELFA-211ENST00000458616 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
NELFA-211ENST00000458616 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
NELFA-211ENST00000458616 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
NELFA-211ENST00000458616 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
NELFA-211ENST00000458616 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
NELFA-211ENST00000458616 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
NELFA-211ENST00000458616 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
NELFA-211ENST00000458616 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
NELFA-211ENST00000458616 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
NELFA-211ENST00000458616 DNAJC5Q9H3Z4 198 aa32.47■■■□□ 2.79
NELFA-211ENST00000458616 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
NELFA-211ENST00000458616 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
NELFA-211ENST00000458616 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
NELFA-211ENST00000458616 NESP48681 1621 aa32.38■■■□□ 2.77
NELFA-211ENST00000458616 MROH2BQ7Z745 1585 aa32.38■■■□□ 2.77
NELFA-211ENST00000458616 CUX2O14529 1486 aa32.37■■■□□ 2.77
NELFA-211ENST00000458616 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
NELFA-211ENST00000458616 THOC2Q8NI27 1593 aaKnown RBP31.95■■■□□ 2.71
NELFA-211ENST00000458616 WIZO95785 1651 aa31.95■■■□□ 2.7
NELFA-211ENST00000458616 PDS5BQ9NTI5 1447 aa31.91■■■□□ 2.7
NELFA-211ENST00000458616 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
NELFA-211ENST00000458616 KIF21AQ7Z4S6 1674 aa31.85■■■□□ 2.69
NELFA-211ENST00000458616 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
NELFA-211ENST00000458616 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
NELFA-211ENST00000458616 WDR62O43379 1518 aa31.54■■■□□ 2.64
NELFA-211ENST00000458616 CFTRP13569 1480 aa31.52■■■□□ 2.64
NELFA-211ENST00000458616 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
NELFA-211ENST00000458616 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
NELFA-211ENST00000458616 CEP164Q9UPV0 1460 aa31.47■■■□□ 2.63
NELFA-211ENST00000458616 URB2Q14146 1524 aaKnown RBP31.26■■■□□ 2.59
NELFA-211ENST00000458616 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
NELFA-211ENST00000458616 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
NELFA-211ENST00000458616 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
NELFA-211ENST00000458616 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
NELFA-211ENST00000458616 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
NELFA-211ENST00000458616 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
NELFA-211ENST00000458616 IFT140Q96RY7 1462 aa30.88■■■□□ 2.53
NELFA-211ENST00000458616 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
NELFA-211ENST00000458616 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
NELFA-211ENST00000458616 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.496e-15■■■■■ 31.2
NELFA-211ENST00000458616 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
NELFA-211ENST00000458616 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
NELFA-211ENST00000458616 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
NELFA-211ENST00000458616 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
NELFA-211ENST00000458616 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.47
NELFA-211ENST00000458616 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.47
NELFA-211ENST00000458616 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.47
NELFA-211ENST00000458616 SOGA1O94964 1423 aa30.48■■■□□ 2.47
NELFA-211ENST00000458616 TDRD9Q8NDG6 1382 aaKnown RBP30.45■■■□□ 2.47
NELFA-211ENST00000458616 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
NELFA-211ENST00000458616 CUX1P39880 1505 aa30.4■■■□□ 2.46
NELFA-211ENST00000458616 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
NELFA-211ENST00000458616 FBLN2P98095 1184 aa30.38■■■□□ 2.45
NELFA-211ENST00000458616 CHD1O14646 1710 aa30.36■■■□□ 2.45
NELFA-211ENST00000458616 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
NELFA-211ENST00000458616 CYB5RLQ6IPT4 315 aa30.28■■■□□ 2.44
NELFA-211ENST00000458616 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
NELFA-211ENST00000458616 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
NELFA-211ENST00000458616 CHMP7Q8WUX9 453 aaPredicted RBP30.17■■■□□ 2.42
NELFA-211ENST00000458616 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
NELFA-211ENST00000458616 ARAP1Q96P48 1450 aa30.16■■■□□ 2.42
NELFA-211ENST00000458616 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
NELFA-211ENST00000458616 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
NELFA-211ENST00000458616 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
NELFA-211ENST00000458616 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
NELFA-211ENST00000458616 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
NELFA-211ENST00000458616 SYNJ1O43426 1573 aa30■■■□□ 2.39
NELFA-211ENST00000458616 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
NELFA-211ENST00000458616 PBRM1Q86U86 1689 aa29.96■■■□□ 2.39
NELFA-211ENST00000458616 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
NELFA-211ENST00000458616 TRHP20396 242 aaPredicted RBP29.88■■■□□ 2.37
NELFA-211ENST00000458616 TOP2BQ02880 1626 aa29.86■■■□□ 2.37
NELFA-211ENST00000458616 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
NELFA-211ENST00000458616 GRIN2AQ12879 1464 aa29.78■■■□□ 2.36
NELFA-211ENST00000458616 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
NELFA-211ENST00000458616 NUP160Q12769 1436 aa29.71■■■□□ 2.35
NELFA-211ENST00000458616 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
NELFA-211ENST00000458616 CEP170Q5SW79 1584 aa29.68■■■□□ 2.34
NELFA-211ENST00000458616 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
NELFA-211ENST00000458616 ERICH3Q5RHP9 1530 aa29.65■■■□□ 2.34
NELFA-211ENST00000458616 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
NELFA-211ENST00000458616 JPH4Q96JJ6 628 aa29.46■■■□□ 2.31
NELFA-211ENST00000458616 PRG4Q92954 1404 aaPredicted RBP29.43■■■□□ 2.3
NELFA-211ENST00000458616 IGF1RP08069 1367 aa29.4■■■□□ 2.3
NELFA-211ENST00000458616 RUSC2Q8N2Y8 1516 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms