Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 LIN7B-207ENST00000595200 795 ntTSL 318.91■□□□□ 0.623e-6■■□□□ 13.4
PRPF8Q6P2Q9 MATK-210ENST00000590849 571 ntTSL 418.86■□□□□ 0.613e-6■■□□□ 13.4
PRPF8Q6P2Q9 MATK-212ENST00000591059 594 ntTSL 418.38■□□□□ 0.533e-6■■□□□ 13.4
PRPF8Q6P2Q9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.473e-6■■□□□ 13.4
PRPF8Q6P2Q9 FGFR4-214ENST00000513166 594 ntTSL 417.9■□□□□ 0.468e-17■■□□□ 13.4
PRPF8Q6P2Q9 FGFR4-209ENST00000507708 476 ntTSL 317.78■□□□□ 0.448e-17■■□□□ 13.4
PRPF8Q6P2Q9 FGFR4-212ENST00000510911 709 ntTSL 417.78■□□□□ 0.448e-17■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-217ENST00000531437 802 ntTSL 517.39■□□□□ 0.373e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-214ENST00000529351 1079 ntTSL 516.77■□□□□ 0.283e-6■■□□□ 13.4
PRPF8Q6P2Q9 TUBGCP6-202ENST00000425018 1509 ntTSL 1 (best)16.45■□□□□ 0.225e-7■■□□□ 13.4
PRPF8Q6P2Q9 MATK-207ENST00000590028 724 ntTSL 415.59■□□□□ 0.093e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-212ENST00000528936 569 ntTSL 515.49■□□□□ 0.073e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-223ENST00000533385 746 ntTSL 515.49■□□□□ 0.073e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.08■□□□□ 03e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-202ENST00000456706 606 ntTSL 415.06■□□□□ 03e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-226ENST00000625752 709 ntTSL 514.96□□□□□ -0.013e-6■■□□□ 13.4
PRPF8Q6P2Q9 PTPN23-204ENST00000477276 882 ntTSL 514.9□□□□□ -0.022e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-212ENST00000533318 1565 ntTSL 214.88□□□□□ -0.033e-6■■□□□ 13.4
PRPF8Q6P2Q9 MATK-211ENST00000590980 562 ntTSL 414.86□□□□□ -0.033e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-230ENST00000629634 579 ntTSL 314.84□□□□□ -0.033e-6■■□□□ 13.4
PRPF8Q6P2Q9 DUS1L-214ENST00000582407 714 ntTSL 514.14□□□□□ -0.153e-12■■□□□ 13.4
PRPF8Q6P2Q9 SRRT-212ENST00000487311 563 ntTSL 214.14□□□□□ -0.151e-11■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.02□□□□□ -0.163e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-213ENST00000529066 558 ntTSL 413.82□□□□□ -0.23e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.67□□□□□ -0.222e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCNL2-219ENST00000497013 548 ntTSL 213.63□□□□□ -0.235e-9■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-211ENST00000528606 741 ntTSL 513.43□□□□□ -0.263e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-225ENST00000625419 816 ntTSL 513.43□□□□□ -0.263e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-227ENST00000627843 1021 ntTSL 213.43□□□□□ -0.263e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-219ENST00000531534 824 ntTSL 513.1□□□□□ -0.313e-6■■□□□ 13.4
PRPF8Q6P2Q9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.08□□□□□ -0.315e-9■■□□□ 13.4
PRPF8Q6P2Q9 GNB1-206ENST00000471354 1512 ntTSL 512.77□□□□□ -0.361e-7■■□□□ 13.4
PRPF8Q6P2Q9 CSNK1E-210ENST00000442216 787 ntTSL 212.71□□□□□ -0.376e-7■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-222ENST00000532484 839 ntTSL 512.52□□□□□ -0.413e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-218ENST00000531514 641 ntTSL 412.25□□□□□ -0.453e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-224ENST00000625316 608 ntTSL 412.01□□□□□ -0.493e-6■■□□□ 13.4
PRPF8Q6P2Q9 ARAP3-202ENST00000504448 1765 ntTSL 1 (best)11.96□□□□□ -0.53e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-204ENST00000524891 560 ntTSL 211.8□□□□□ -0.523e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-202ENST00000517979 877 ntTSL 1 (best)11.74□□□□□ -0.532e-6■■□□□ 13.4
PRPF8Q6P2Q9 ANKLE2-206ENST00000538766 1557 ntTSL 211.6□□□□□ -0.556e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.568e-8■■□□□ 13.4
PRPF8Q6P2Q9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.583e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-211ENST00000524084 460 ntTSL 311.35□□□□□ -0.592e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.32□□□□□ -0.63e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.63e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.25□□□□□ -0.613e-6■■□□□ 13.4
PRPF8Q6P2Q9 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC11.17□□□□□ -0.623e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-209ENST00000527723 666 ntTSL 410.81□□□□□ -0.683e-6■■□□□ 13.4
PRPF8Q6P2Q9 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.49□□□□□ -0.733e-6■■□□□ 13.4
PRPF8Q6P2Q9 CSNK1E-211ENST00000451964 873 ntTSL 310.47□□□□□ -0.735e-7■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-206ENST00000520202 1734 ntTSL 1 (best)10.29□□□□□ -0.762e-6■■□□□ 13.4
PRPF8Q6P2Q9 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.2□□□□□ -0.783e-6■■□□□ 13.4
PRPF8Q6P2Q9 RNF220-213ENST00000480686 3835 ntTSL 210.1□□□□□ -0.791e-11■■□□□ 13.4
PRPF8Q6P2Q9 TRAF2-205ENST00000466107 233 ntTSL 310.01□□□□□ -0.811e-11■■□□□ 13.4
PRPF8Q6P2Q9 ARAP3-205ENST00000513878 3810 ntTSL 2 BASIC9.79□□□□□ -0.843e-6■■□□□ 13.4
PRPF8Q6P2Q9 DDX6-203ENST00000529162 1795 ntTSL 29.67□□□□□ -0.861e-7■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-210ENST00000523841 947 ntTSL 29.5□□□□□ -0.892e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-207ENST00000526152 565 ntTSL 49.43□□□□□ -0.93e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC25A22-210ENST00000527734 583 ntTSL 49.16□□□□□ -0.943e-6■■□□□ 13.4
PRPF8Q6P2Q9 RNF220-210ENST00000474394 810 ntTSL 39.07□□□□□ -0.961e-11■■□□□ 13.4
PRPF8Q6P2Q9 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC9.02□□□□□ -0.973e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-204ENST00000519509 977 ntTSL 28.58□□□□□ -1.042e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-203ENST00000524460 796 ntTSL 57.92□□□□□ -1.143e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-207ENST00000520486 3586 ntTSL 1 (best)7.75□□□□□ -1.172e-6■■□□□ 13.4
PRPF8Q6P2Q9 MADD-217ENST00000489415 923 ntTSL 37.5□□□□□ -1.213e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.222e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-204ENST00000526579 907 ntTSL 35.89□□□□□ -1.473e-6■■□□□ 13.4
PRPF8Q6P2Q9 THOC1-210ENST00000580870 552 ntTSL 35.64□□□□□ -1.511e-20■■□□□ 13.4
PRPF8Q6P2Q9 THOC1-204ENST00000578224 789 ntTSL 1 (best)5.47□□□□□ -1.532e-11■■□□□ 13.4
PRPF8Q6P2Q9 THOC1-209ENST00000580544 496 ntTSL 35.47□□□□□ -1.531e-20■■□□□ 13.4
PRPF8Q6P2Q9 MADD-212ENST00000428807 549 ntTSL 45.46□□□□□ -1.543e-6■■□□□ 13.4
PRPF8Q6P2Q9 CSNK1E-214ENST00000498529 381 ntTSL 35.19□□□□□ -1.586e-7■■□□□ 13.4
PRPF8Q6P2Q9 PIKFYVE-205ENST00000422495 792 ntTSL 54.68□□□□□ -1.663e-6■■□□□ 13.4
PRPF8Q6P2Q9 RRM1-203ENST00000526350 583 ntTSL 24.38□□□□□ -1.713e-6■■□□□ 13.4
PRPF8Q6P2Q9 SNX19-206ENST00000527451 498 ntTSL 34.28□□□□□ -1.723e-6■■□□□ 13.4
PRPF8Q6P2Q9 CLNS1A-212ENST00000533957 369 ntTSL 44.21□□□□□ -1.743e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.13□□□□□ -1.752e-6■■□□□ 13.4
PRPF8Q6P2Q9 NRDC-207ENST00000475310 1025 ntTSL 21.75□□□□□ -2.133e-6■■□□□ 13.4
PRPF8Q6P2Q9 NAA15-207ENST00000496716 677 ntTSL 31.44□□□□□ -2.183e-6■■□□□ 13.4
PRPF8Q6P2Q9 REXO2-210ENST00000540492 1088 ntTSL 21.4□□□□□ -2.193e-6■■□□□ 13.4
PRPF8Q6P2Q9 CCDC25-205ENST00000519843 481 ntTSL 21.36□□□□□ -2.193e-6■■□□□ 13.4
PRPF8Q6P2Q9 MAD1L1-205ENST00000421113 564 ntTSL 417.18■□□□□ 0.345e-6■■□□□ 13.4
PRPF8Q6P2Q9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC12.03□□□□□ -0.481e-8■■□□□ 13.4
PRPF8Q6P2Q9 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.071e-8■■□□□ 13.4
PRPF8Q6P2Q9 COASY-209ENST00000588353 387 ntTSL 313.56□□□□□ -0.242e-10■■□□□ 13.4
PRPF8Q6P2Q9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.38□□□□□ -0.593e-6■■□□□ 13.4
PRPF8Q6P2Q9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.9■□□□□ 0.144e-7■■□□□ 13.4
PRPF8Q6P2Q9 FAM160B2-202ENST00000427751 932 ntTSL 518.05■□□□□ 0.485e-7■■□□□ 13.4
PRPF8Q6P2Q9 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.56e-7■■□□□ 13.4
PRPF8Q6P2Q9 AC009119.2-202ENST00000563312 458 ntTSL 211.68□□□□□ -0.546e-7■■□□□ 13.4
PRPF8Q6P2Q9 TRAPPC4-213ENST00000533149 1340 ntTSL 210.07□□□□□ -0.86e-7■■□□□ 13.4
PRPF8Q6P2Q9 AC009119.2-203ENST00000566309 583 ntTSL 25.61□□□□□ -1.516e-7■■□□□ 13.4
PRPF8Q6P2Q9 TOP2A-203ENST00000577706 554 ntTSL 20.71□□□□□ -2.34e-8■■□□□ 13.4
PRPF8Q6P2Q9 MLLT6-201ENST00000611305 483 ntTSL 213.43□□□□□ -0.263e-29■■□□□ 13.4
PRPF8Q6P2Q9 GUK1-228ENST00000485168 737 ntTSL 314.37□□□□□ -0.111e-7■■□□□ 13.4
PRPF8Q6P2Q9 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.729e-7■■□□□ 13.4
PRPF8Q6P2Q9 RFESD-203ENST00000458310 2788 ntTSL 5 BASIC9.25□□□□□ -0.939e-7■■□□□ 13.4
PRPF8Q6P2Q9 RFESD-207ENST00000511684 615 ntTSL 38.98□□□□□ -0.979e-7■■□□□ 13.4
PRPF8Q6P2Q9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.51□□□□□ -1.859e-7■■□□□ 13.4
PRPF8Q6P2Q9 UPF3A-211ENST00000618700 1210 ntTSL 216.37■□□□□ 0.214e-11■■□□□ 13.4
Retrieved 100 of 73,762 protein–RNA pairs in 1529.9 ms