RNA–Protein interactions for RNA: ENST00000524084.5

CCDC25-211, Transcript of coiled-coil domain containing 25, humanhuman

TSL 3

Gene CCDC25, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-211ENST00000524084 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
CCDC25-211ENST00000524084 ABCC9O60706 1549 aa29.44■■■□□ 2.3
CCDC25-211ENST00000524084 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
CCDC25-211ENST00000524084 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
CCDC25-211ENST00000524084 NACADO15069 1562 aa27.86■■■□□ 2.05
CCDC25-211ENST00000524084 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
CCDC25-211ENST00000524084 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
CCDC25-211ENST00000524084 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
CCDC25-211ENST00000524084 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
CCDC25-211ENST00000524084 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
CCDC25-211ENST00000524084 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
CCDC25-211ENST00000524084 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
CCDC25-211ENST00000524084 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
CCDC25-211ENST00000524084 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
CCDC25-211ENST00000524084 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
CCDC25-211ENST00000524084 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
CCDC25-211ENST00000524084 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
CCDC25-211ENST00000524084 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
CCDC25-211ENST00000524084 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
CCDC25-211ENST00000524084 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
CCDC25-211ENST00000524084 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
CCDC25-211ENST00000524084 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
CCDC25-211ENST00000524084 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
CCDC25-211ENST00000524084 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
CCDC25-211ENST00000524084 CUX2O14529 1486 aa25.48■■□□□ 1.67
CCDC25-211ENST00000524084 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
CCDC25-211ENST00000524084 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
CCDC25-211ENST00000524084 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
CCDC25-211ENST00000524084 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
CCDC25-211ENST00000524084 NESP48681 1621 aa25.24■■□□□ 1.63
CCDC25-211ENST00000524084 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
CCDC25-211ENST00000524084 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.62
CCDC25-211ENST00000524084 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
CCDC25-211ENST00000524084 THOC2Q8NI27 1593 aaKnown RBP25.03■■□□□ 1.6
CCDC25-211ENST00000524084 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
CCDC25-211ENST00000524084 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
CCDC25-211ENST00000524084 WIZO95785 1651 aa24.85■■□□□ 1.57
CCDC25-211ENST00000524084 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
CCDC25-211ENST00000524084 WDR62O43379 1518 aa24.71■■□□□ 1.55
CCDC25-211ENST00000524084 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
CCDC25-211ENST00000524084 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
CCDC25-211ENST00000524084 CFTRP13569 1480 aa24.63■■□□□ 1.53
CCDC25-211ENST00000524084 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
CCDC25-211ENST00000524084 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
CCDC25-211ENST00000524084 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
CCDC25-211ENST00000524084 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
CCDC25-211ENST00000524084 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
CCDC25-211ENST00000524084 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
CCDC25-211ENST00000524084 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
CCDC25-211ENST00000524084 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
CCDC25-211ENST00000524084 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
CCDC25-211ENST00000524084 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
CCDC25-211ENST00000524084 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
CCDC25-211ENST00000524084 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
CCDC25-211ENST00000524084 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
CCDC25-211ENST00000524084 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
CCDC25-211ENST00000524084 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
CCDC25-211ENST00000524084 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
CCDC25-211ENST00000524084 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
CCDC25-211ENST00000524084 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.42
CCDC25-211ENST00000524084 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.411e-6■■■■■ 32.8
CCDC25-211ENST00000524084 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
CCDC25-211ENST00000524084 SOGA1O94964 1423 aa23.8■■□□□ 1.4
CCDC25-211ENST00000524084 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
CCDC25-211ENST00000524084 CHD1O14646 1710 aa23.77■■□□□ 1.4
CCDC25-211ENST00000524084 FBLN2P98095 1184 aa23.77■■□□□ 1.4
CCDC25-211ENST00000524084 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
CCDC25-211ENST00000524084 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
CCDC25-211ENST00000524084 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
CCDC25-211ENST00000524084 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
CCDC25-211ENST00000524084 CUX1P39880 1505 aa23.68■■□□□ 1.38
CCDC25-211ENST00000524084 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
CCDC25-211ENST00000524084 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
CCDC25-211ENST00000524084 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
CCDC25-211ENST00000524084 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
CCDC25-211ENST00000524084 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
CCDC25-211ENST00000524084 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
CCDC25-211ENST00000524084 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
CCDC25-211ENST00000524084 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
CCDC25-211ENST00000524084 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
CCDC25-211ENST00000524084 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
CCDC25-211ENST00000524084 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
CCDC25-211ENST00000524084 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
CCDC25-211ENST00000524084 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
CCDC25-211ENST00000524084 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
CCDC25-211ENST00000524084 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
CCDC25-211ENST00000524084 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
CCDC25-211ENST00000524084 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
CCDC25-211ENST00000524084 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
CCDC25-211ENST00000524084 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
CCDC25-211ENST00000524084 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
CCDC25-211ENST00000524084 NUP160Q12769 1436 aa23.23■■□□□ 1.31
CCDC25-211ENST00000524084 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
CCDC25-211ENST00000524084 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
CCDC25-211ENST00000524084 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
CCDC25-211ENST00000524084 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
CCDC25-211ENST00000524084 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
CCDC25-211ENST00000524084 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
CCDC25-211ENST00000524084 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
CCDC25-211ENST00000524084 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms