RNA–Protein interactions for RNA: ENST00000507708.1

FGFR4-209, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 3

Gene FGFR4, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-209ENST00000507708 NISCHQ9Y2I1 1504 aa51.37■■■■■ 5.81
FGFR4-209ENST00000507708 CCDC180Q9P1Z9 1646 aa45.77■■■■■ 4.92
FGFR4-209ENST00000507708 ABCC9O60706 1549 aa45.31■■■■■ 4.84
FGFR4-209ENST00000507708 RB1CC1Q8TDY2 1594 aa43.37■■■■■ 4.53
FGFR4-209ENST00000507708 NACADO15069 1562 aa43.22■■■■■ 4.51
FGFR4-209ENST00000507708 DCAF8L2P0C7V8 631 aa43.22■■■■■ 4.51
FGFR4-209ENST00000507708 MYO15BQ96JP2 1530 aa42.83■■■■■ 4.45
FGFR4-209ENST00000507708 ZCCHC6Q5VYS8 1495 aaKnown RBP42.68■■■■■ 4.42
FGFR4-209ENST00000507708 DCAF1Q9Y4B6 1507 aa42.48■■■■■ 4.39
FGFR4-209ENST00000507708 PABPN1Q86U42 306 aaKnown RBP eCLIP42.32■■■■■ 4.37
FGFR4-209ENST00000507708 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
FGFR4-209ENST00000507708 BICRAQ9NZM4 1560 aa42.02■■■■■ 4.32
FGFR4-209ENST00000507708 DNAJC5BQ9UF47 199 aa42.01■■■■■ 4.32
FGFR4-209ENST00000507708 SCRIBQ14160 1630 aa41.77■■■■■ 4.28
FGFR4-209ENST00000507708 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
FGFR4-209ENST00000507708 EIF4G1Q04637 1599 aaKnown RBP40.99■■■■■ 4.15
FGFR4-209ENST00000507708 CC2D2AQ9P2K1 1620 aa40.9■■■■■ 4.14
FGFR4-209ENST00000507708 CECR2Q9BXF3 1484 aa40.77■■■■■ 4.12
FGFR4-209ENST00000507708 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
FGFR4-209ENST00000507708 SMARCA4P51532 1647 aa39.9■■■■□ 3.98
FGFR4-209ENST00000507708 ATAD2BQ9ULI0 1458 aa39.87■■■■□ 3.97
FGFR4-209ENST00000507708 BAZ1AQ9NRL2 1556 aaPredicted RBP39.84■■■■□ 3.97
FGFR4-209ENST00000507708 SMARCA2P51531 1590 aa39.78■■■■□ 3.96
FGFR4-209ENST00000507708 HMGXB3Q12766 1538 aa39.64■■■■□ 3.94
FGFR4-209ENST00000507708 MROH2BQ7Z745 1585 aa39.56■■■■□ 3.92
FGFR4-209ENST00000507708 PEG3Q9GZU2 1588 aa39.54■■■■□ 3.92
FGFR4-209ENST00000507708 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
FGFR4-209ENST00000507708 ERCC6Q03468 1493 aa39.12■■■■□ 3.85
FGFR4-209ENST00000507708 WIZO95785 1651 aa39.06■■■■□ 3.84
FGFR4-209ENST00000507708 NESP48681 1621 aa39.05■■■■□ 3.84
FGFR4-209ENST00000507708 RSF1Q96T23 1441 aaPredicted RBP39.01■■■■□ 3.84
FGFR4-209ENST00000507708 LAMC3Q9Y6N6 1575 aa38.89■■■■□ 3.82
FGFR4-209ENST00000507708 CUX2O14529 1486 aa38.84■■■■□ 3.81
FGFR4-209ENST00000507708 CADPSQ9ULU8 1353 aa38.77■■■■□ 3.8
FGFR4-209ENST00000507708 PDS5BQ9NTI5 1447 aa38.73■■■■□ 3.79
FGFR4-209ENST00000507708 TOP2AP11388 1531 aaKnown RBP38.68■■■■□ 3.78
FGFR4-209ENST00000507708 THOC2Q8NI27 1593 aaKnown RBP38.49■■■■□ 3.75
FGFR4-209ENST00000507708 KIF21AQ7Z4S6 1674 aa38.48■■■■□ 3.75
FGFR4-209ENST00000507708 CFTRP13569 1480 aa38.41■■■■□ 3.74
FGFR4-209ENST00000507708 MRC2Q9UBG0 1479 aa38.31■■■■□ 3.72
FGFR4-209ENST00000507708 FANCD2Q9BXW9 1451 aa38.28■■■■□ 3.72
FGFR4-209ENST00000507708 CEP164Q9UPV0 1460 aa38.28■■■■□ 3.72
FGFR4-209ENST00000507708 CCDC88BA6NC98 1476 aa38.25■■■■□ 3.71
FGFR4-209ENST00000507708 DNAJC5Q9H3Z4 198 aa38.23■■■■□ 3.71
FGFR4-209ENST00000507708 WDR62O43379 1518 aa38.16■■■■□ 3.7
FGFR4-209ENST00000507708 URB2Q14146 1524 aaKnown RBP37.9■■■■□ 3.66
FGFR4-209ENST00000507708 PRDM2Q13029 1718 aa37.89■■■■□ 3.66
FGFR4-209ENST00000507708 SUPT5HO00267 1087 aaKnown RBP37.75■■■■□ 3.63
FGFR4-209ENST00000507708 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
FGFR4-209ENST00000507708 TOPBP1Q92547 1522 aa37.6■■■■□ 3.61
FGFR4-209ENST00000507708 IFT140Q96RY7 1462 aa37.51■■■■□ 3.59
FGFR4-209ENST00000507708 DNMBPQ6XZF7 1577 aa37.5■■■■□ 3.59
FGFR4-209ENST00000507708 ZNF608Q9ULD9 1512 aaPredicted RBP37.34■■■■□ 3.57
FGFR4-209ENST00000507708 POLA1P09884 1462 aaPredicted RBP37.26■■■■□ 3.55
FGFR4-209ENST00000507708 OSCARQ8IYS5 282 aa37.24■■■■□ 3.55
FGFR4-209ENST00000507708 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
FGFR4-209ENST00000507708 SOGA1O94964 1423 aa37.15■■■■□ 3.54
FGFR4-209ENST00000507708 CUX1P39880 1505 aa37.14■■■■□ 3.54
FGFR4-209ENST00000507708 EIF4G3O43432 1585 aaKnown RBP37.12■■■■□ 3.53
FGFR4-209ENST00000507708 AQRO60306 1485 aaKnown RBP eCLIP37.11■■■■□ 3.539e-11■■■■■ 80
FGFR4-209ENST00000507708 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
FGFR4-209ENST00000507708 RAD54L2Q9Y4B4 1467 aa37.11■■■■□ 3.53
FGFR4-209ENST00000507708 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
FGFR4-209ENST00000507708 WDR97A6NE52 1622 aa36.88■■■■□ 3.5
FGFR4-209ENST00000507708 FBLN2P98095 1184 aa36.82■■■■□ 3.48
FGFR4-209ENST00000507708 WRNQ14191 1432 aaPredicted RBP eCLIP36.8■■■■□ 3.48
FGFR4-209ENST00000507708 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
FGFR4-209ENST00000507708 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
FGFR4-209ENST00000507708 SNAPC4Q5SXM2 1469 aa36.74■■■■□ 3.47
FGFR4-209ENST00000507708 ABCA10Q8WWZ4 1543 aa36.73■■■■□ 3.47
FGFR4-209ENST00000507708 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
FGFR4-209ENST00000507708 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
FGFR4-209ENST00000507708 MAGI1Q96QZ7 1491 aaPredicted RBP36.69■■■■□ 3.46
FGFR4-209ENST00000507708 CHD1O14646 1710 aa36.68■■■■□ 3.46
FGFR4-209ENST00000507708 CHMP7Q8WUX9 453 aaPredicted RBP36.66■■■■□ 3.46
FGFR4-209ENST00000507708 BIVM-ERCC5R4GMW8 1640 aa36.65■■■■□ 3.46
FGFR4-209ENST00000507708 SYNJ1O43426 1573 aa36.65■■■■□ 3.46
FGFR4-209ENST00000507708 SYNJ2O15056 1496 aa36.56■■■■□ 3.44
FGFR4-209ENST00000507708 ABCA5Q8WWZ7 1642 aa36.55■■■■□ 3.44
FGFR4-209ENST00000507708 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
FGFR4-209ENST00000507708 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
FGFR4-209ENST00000507708 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
FGFR4-209ENST00000507708 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
FGFR4-209ENST00000507708 PBRM1Q86U86 1689 aa36.49■■■■□ 3.43
FGFR4-209ENST00000507708 CLASP1Q7Z460 1538 aa36.35■■■■□ 3.41
FGFR4-209ENST00000507708 CYB5RLQ6IPT4 315 aa36.31■■■■□ 3.4
FGFR4-209ENST00000507708 ERICH3Q5RHP9 1530 aa36.28■■■■□ 3.4
FGFR4-209ENST00000507708 FHAD1B1AJZ9 1412 aa36.26■■■■□ 3.4
FGFR4-209ENST00000507708 GRIN2AQ12879 1464 aa36.25■■■■□ 3.39
FGFR4-209ENST00000507708 ADAMTS12P58397 1594 aa36.25■■■■□ 3.39
FGFR4-209ENST00000507708 ARAP1Q96P48 1450 aa36.21■■■■□ 3.39
FGFR4-209ENST00000507708 NUP160Q12769 1436 aa36.12■■■■□ 3.37
FGFR4-209ENST00000507708 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
FGFR4-209ENST00000507708 CEP170Q5SW79 1584 aa36.04■■■■□ 3.36
FGFR4-209ENST00000507708 IGF1RP08069 1367 aa36■■■■□ 3.35
FGFR4-209ENST00000507708 JPH4Q96JJ6 628 aa35.82■■■■□ 3.32
FGFR4-209ENST00000507708 SHROOM2Q13796 1616 aa35.82■■■■□ 3.32
FGFR4-209ENST00000507708 CUL7Q14999 1698 aa35.81■■■■□ 3.32
FGFR4-209ENST00000507708 ERCC6L2Q5T890 1561 aa35.8■■■■□ 3.32
FGFR4-209ENST00000507708 CARMIL1Q5VZK9 1371 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms