RNA–Protein interactions for RNA: ENST00000527451.1

SNX19-206, Transcript of sorting nexin 19, humanhuman

TSL 3

Gene SNX19, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-206ENST00000527451 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
SNX19-206ENST00000527451 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
SNX19-206ENST00000527451 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
SNX19-206ENST00000527451 PHF23Q9BUL5 403 aaPredicted RBP11.57□□□□□ -0.56
SNX19-206ENST00000527451 SENP3Q9H4L4 574 aaPredicted RBP11.29□□□□□ -0.6
SNX19-206ENST00000527451 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
SNX19-206ENST00000527451 PLPPR3Q6T4P5 718 aa10.63□□□□□ -0.71
SNX19-206ENST00000527451 FOXD1Q16676 465 aa10.53□□□□□ -0.72
SNX19-206ENST00000527451 ZCCHC6Q5VYS8 1495 aaKnown RBP10.51□□□□□ -0.73
SNX19-206ENST00000527451 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
SNX19-206ENST00000527451 DCAF1Q9Y4B6 1507 aa10.31□□□□□ -0.76
SNX19-206ENST00000527451 PPP6R1Q9UPN7 881 aa10.21□□□□□ -0.77
SNX19-206ENST00000527451 ADRA2BP18089 450 aa10.19□□□□□ -0.78
SNX19-206ENST00000527451 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
SNX19-206ENST00000527451 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
SNX19-206ENST00000527451 MYO15BQ96JP2 1530 aa10.08□□□□□ -0.8
SNX19-206ENST00000527451 PIAS4Q8N2W9 510 aaPredicted RBP9.92□□□□□ -0.82
SNX19-206ENST00000527451 NACADO15069 1562 aa9.91□□□□□ -0.82
SNX19-206ENST00000527451 ABCC9O60706 1549 aa9.88□□□□□ -0.83
SNX19-206ENST00000527451 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
SNX19-206ENST00000527451 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
SNX19-206ENST00000527451 RB1CC1Q8TDY2 1594 aa9.74□□□□□ -0.85
SNX19-206ENST00000527451 CECR2Q9BXF3 1484 aa9.62□□□□□ -0.87
SNX19-206ENST00000527451 MSH5O43196 834 aa9.62□□□□□ -0.87
SNX19-206ENST00000527451 MROH2BQ7Z745 1585 aa9.61□□□□□ -0.87
SNX19-206ENST00000527451 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
SNX19-206ENST00000527451 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
SNX19-206ENST00000527451 WIZO95785 1651 aa9.52□□□□□ -0.89
SNX19-206ENST00000527451 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
SNX19-206ENST00000527451 SMARCA4P51532 1647 aa9.48□□□□□ -0.89
SNX19-206ENST00000527451 TOP2AP11388 1531 aaKnown RBP9.47□□□□□ -0.89
SNX19-206ENST00000527451 UNC13AQ9UPW8 1703 aa9.46□□□□□ -0.89
SNX19-206ENST00000527451 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
SNX19-206ENST00000527451 HRCP23327 699 aa9.41□□□□□ -0.9
SNX19-206ENST00000527451 PPP4R3CPQ6ZMV5 832 aa9.41□□□□□ -0.9
SNX19-206ENST00000527451 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
SNX19-206ENST00000527451 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.9
SNX19-206ENST00000527451 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
SNX19-206ENST00000527451 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
SNX19-206ENST00000527451 PEG3Q9GZU2 1588 aa9.37□□□□□ -0.91
SNX19-206ENST00000527451 TRIM26Q12899 539 aaPredicted RBP9.36□□□□□ -0.91
SNX19-206ENST00000527451 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX19-206ENST00000527451 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
SNX19-206ENST00000527451 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
SNX19-206ENST00000527451 KCNA4P22459 653 aa9.27□□□□□ -0.93
SNX19-206ENST00000527451 EEA1Q15075 1411 aa9.27□□□□□ -0.93
SNX19-206ENST00000527451 MAPK8IP2Q13387 824 aaPredicted RBP9.26□□□□□ -0.93
SNX19-206ENST00000527451 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
SNX19-206ENST00000527451 BAZ1BQ9UIG0 1483 aaKnown RBP9.24□□□□□ -0.93
SNX19-206ENST00000527451 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
SNX19-206ENST00000527451 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
SNX19-206ENST00000527451 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
SNX19-206ENST00000527451 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
SNX19-206ENST00000527451 SOGA1O94964 1423 aa9.17□□□□□ -0.94
SNX19-206ENST00000527451 TNIKQ9UKE5 1360 aa9.17□□□□□ -0.94
SNX19-206ENST00000527451 EHMT2Q96KQ7 1210 aa9.16□□□□□ -0.94
SNX19-206ENST00000527451 NCAPD3P42695 1498 aa9.15□□□□□ -0.94
SNX19-206ENST00000527451 HMGXB3Q12766 1538 aa9.15□□□□□ -0.95
SNX19-206ENST00000527451 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
SNX19-206ENST00000527451 NCBP3Q53F19 620 aaKnown RBP9.12□□□□□ -0.95
SNX19-206ENST00000527451 CEP162Q5TB80 1403 aa9.12□□□□□ -0.95
SNX19-206ENST00000527451 SYNJ1O43426 1573 aa9.11□□□□□ -0.95
SNX19-206ENST00000527451 CNKSR2Q8WXI2 1034 aa9.1□□□□□ -0.95
SNX19-206ENST00000527451 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
SNX19-206ENST00000527451 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.95
SNX19-206ENST00000527451 KIF21BO75037 1637 aa9.09□□□□□ -0.95
SNX19-206ENST00000527451 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
SNX19-206ENST00000527451 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
SNX19-206ENST00000527451 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
SNX19-206ENST00000527451 NPM3O75607 178 aaKnown RBP9.05□□□□□ -0.96
SNX19-206ENST00000527451 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
SNX19-206ENST00000527451 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
SNX19-206ENST00000527451 CFTRP13569 1480 aa9.02□□□□□ -0.96
SNX19-206ENST00000527451 CLIP1P30622 1438 aa8.99□□□□□ -0.97
SNX19-206ENST00000527451 ERICH3Q5RHP9 1530 aa8.98□□□□□ -0.97
SNX19-206ENST00000527451 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
SNX19-206ENST00000527451 PRXQ9BXM0 1461 aa8.96□□□□□ -0.97
SNX19-206ENST00000527451 RAPGEF2Q9Y4G8 1499 aa8.96□□□□□ -0.97
SNX19-206ENST00000527451 CUX1P39880 1505 aa8.96□□□□□ -0.97
SNX19-206ENST00000527451 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.98
SNX19-206ENST00000527451 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
SNX19-206ENST00000527451 PRDM2Q13029 1718 aa8.92□□□□□ -0.98
SNX19-206ENST00000527451 CCER1Q8TC90 406 aaPredicted RBP8.92□□□□□ -0.98
SNX19-206ENST00000527451 APLP2Q06481 763 aa8.91□□□□□ -0.98
SNX19-206ENST00000527451 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
SNX19-206ENST00000527451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.89□□□□□ -0.99
SNX19-206ENST00000527451 CC2D2AQ9P2K1 1620 aa8.89□□□□□ -0.99
SNX19-206ENST00000527451 HOXD11P31277 338 aaPredicted RBP8.87□□□□□ -0.99
SNX19-206ENST00000527451 TTBK1Q5TCY1 1321 aaPredicted RBP8.86□□□□□ -0.99
SNX19-206ENST00000527451 CUX2O14529 1486 aa8.84□□□□□ -0.99
SNX19-206ENST00000527451 ARAP1Q96P48 1450 aa8.84□□□□□ -0.99
SNX19-206ENST00000527451 IGF1RP08069 1367 aa8.84□□□□□ -0.99
SNX19-206ENST00000527451 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
SNX19-206ENST00000527451 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
SNX19-206ENST00000527451 SLC4A1APQ9BWU0 796 aaKnown RBP8.8□□□□□ -1
SNX19-206ENST00000527451 CARMIL1Q5VZK9 1371 aa8.8□□□□□ -1
SNX19-206ENST00000527451 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
SNX19-206ENST00000527451 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
SNX19-206ENST00000527451 ARHGAP35Q9NRY4 1499 aa8.78□□□□□ -1
SNX19-206ENST00000527451 MAP3K1Q13233 1512 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms