RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
RNF220-210ENST00000474394 ABCC9O60706 1549 aa23.58■■□□□ 1.36
RNF220-210ENST00000474394 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
RNF220-210ENST00000474394 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
RNF220-210ENST00000474394 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
RNF220-210ENST00000474394 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
RNF220-210ENST00000474394 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
RNF220-210ENST00000474394 NACADO15069 1562 aa21.86■■□□□ 1.09
RNF220-210ENST00000474394 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
RNF220-210ENST00000474394 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.07
RNF220-210ENST00000474394 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
RNF220-210ENST00000474394 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
RNF220-210ENST00000474394 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
RNF220-210ENST00000474394 DNAJC5Q9H3Z4 198 aa21.49■■□□□ 1.03
RNF220-210ENST00000474394 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
RNF220-210ENST00000474394 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
RNF220-210ENST00000474394 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
RNF220-210ENST00000474394 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
RNF220-210ENST00000474394 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
RNF220-210ENST00000474394 CUX2O14529 1486 aa20.63■□□□□ 0.89
RNF220-210ENST00000474394 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
RNF220-210ENST00000474394 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
RNF220-210ENST00000474394 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
RNF220-210ENST00000474394 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
RNF220-210ENST00000474394 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
RNF220-210ENST00000474394 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
RNF220-210ENST00000474394 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
RNF220-210ENST00000474394 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
RNF220-210ENST00000474394 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
RNF220-210ENST00000474394 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
RNF220-210ENST00000474394 NESP48681 1621 aa20.05■□□□□ 0.8
RNF220-210ENST00000474394 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
RNF220-210ENST00000474394 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
RNF220-210ENST00000474394 WIZO95785 1651 aa19.88■□□□□ 0.77
RNF220-210ENST00000474394 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
RNF220-210ENST00000474394 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
RNF220-210ENST00000474394 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
RNF220-210ENST00000474394 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
RNF220-210ENST00000474394 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
RNF220-210ENST00000474394 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
RNF220-210ENST00000474394 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
RNF220-210ENST00000474394 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
RNF220-210ENST00000474394 WDR62O43379 1518 aa19.55■□□□□ 0.72
RNF220-210ENST00000474394 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
RNF220-210ENST00000474394 CFTRP13569 1480 aa19.45■□□□□ 0.7
RNF220-210ENST00000474394 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
RNF220-210ENST00000474394 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
RNF220-210ENST00000474394 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
RNF220-210ENST00000474394 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
RNF220-210ENST00000474394 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
RNF220-210ENST00000474394 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
RNF220-210ENST00000474394 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
RNF220-210ENST00000474394 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
RNF220-210ENST00000474394 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
RNF220-210ENST00000474394 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
RNF220-210ENST00000474394 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
RNF220-210ENST00000474394 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
RNF220-210ENST00000474394 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
RNF220-210ENST00000474394 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
RNF220-210ENST00000474394 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
RNF220-210ENST00000474394 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
RNF220-210ENST00000474394 ARAP1Q96P48 1450 aa19■□□□□ 0.63
RNF220-210ENST00000474394 IFT140Q96RY7 1462 aa19■□□□□ 0.63
RNF220-210ENST00000474394 CHD1O14646 1710 aa18.91■□□□□ 0.62
RNF220-210ENST00000474394 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
RNF220-210ENST00000474394 CUX1P39880 1505 aa18.87■□□□□ 0.61
RNF220-210ENST00000474394 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
RNF220-210ENST00000474394 FBLN2P98095 1184 aa18.84■□□□□ 0.61
RNF220-210ENST00000474394 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
RNF220-210ENST00000474394 SOGA1O94964 1423 aa18.81■□□□□ 0.6
RNF220-210ENST00000474394 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
RNF220-210ENST00000474394 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.62e-8■■■■■ 35.6
RNF220-210ENST00000474394 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
RNF220-210ENST00000474394 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
RNF220-210ENST00000474394 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
RNF220-210ENST00000474394 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
RNF220-210ENST00000474394 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
RNF220-210ENST00000474394 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
RNF220-210ENST00000474394 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
RNF220-210ENST00000474394 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
RNF220-210ENST00000474394 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
RNF220-210ENST00000474394 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
RNF220-210ENST00000474394 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
RNF220-210ENST00000474394 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.57
RNF220-210ENST00000474394 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
RNF220-210ENST00000474394 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
RNF220-210ENST00000474394 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
RNF220-210ENST00000474394 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
RNF220-210ENST00000474394 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
RNF220-210ENST00000474394 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
RNF220-210ENST00000474394 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
RNF220-210ENST00000474394 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
RNF220-210ENST00000474394 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
RNF220-210ENST00000474394 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
RNF220-210ENST00000474394 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
RNF220-210ENST00000474394 KIF13AQ9H1H9 1805 aa18.34■□□□□ 0.53
RNF220-210ENST00000474394 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
RNF220-210ENST00000474394 IGF1RP08069 1367 aa18.3■□□□□ 0.52
RNF220-210ENST00000474394 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
RNF220-210ENST00000474394 NUP160Q12769 1436 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms