RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
CCDC25-201ENST00000356537 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
CCDC25-201ENST00000356537 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
CCDC25-201ENST00000356537 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
CCDC25-201ENST00000356537 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
CCDC25-201ENST00000356537 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
CCDC25-201ENST00000356537 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
CCDC25-201ENST00000356537 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
CCDC25-201ENST00000356537 ABCC9O60706 1549 aa16.83■□□□□ 0.29
CCDC25-201ENST00000356537 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
CCDC25-201ENST00000356537 NACADO15069 1562 aa16.67■□□□□ 0.26
CCDC25-201ENST00000356537 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
CCDC25-201ENST00000356537 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
CCDC25-201ENST00000356537 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
CCDC25-201ENST00000356537 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
CCDC25-201ENST00000356537 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
CCDC25-201ENST00000356537 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
CCDC25-201ENST00000356537 WIZO95785 1651 aa16.2■□□□□ 0.18
CCDC25-201ENST00000356537 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
CCDC25-201ENST00000356537 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
CCDC25-201ENST00000356537 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
CCDC25-201ENST00000356537 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC25-201ENST00000356537 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
CCDC25-201ENST00000356537 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
CCDC25-201ENST00000356537 SMARCA2P51531 1590 aa15.83■□□□□ 0.12
CCDC25-201ENST00000356537 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
CCDC25-201ENST00000356537 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
CCDC25-201ENST00000356537 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
CCDC25-201ENST00000356537 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
CCDC25-201ENST00000356537 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
CCDC25-201ENST00000356537 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
CCDC25-201ENST00000356537 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
CCDC25-201ENST00000356537 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
CCDC25-201ENST00000356537 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
CCDC25-201ENST00000356537 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
CCDC25-201ENST00000356537 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
CCDC25-201ENST00000356537 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
CCDC25-201ENST00000356537 SOGA1O94964 1423 aa15.4■□□□□ 0.06
CCDC25-201ENST00000356537 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
CCDC25-201ENST00000356537 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
CCDC25-201ENST00000356537 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
CCDC25-201ENST00000356537 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
CCDC25-201ENST00000356537 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
CCDC25-201ENST00000356537 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
CCDC25-201ENST00000356537 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
CCDC25-201ENST00000356537 CFTRP13569 1480 aa15.2■□□□□ 0.02
CCDC25-201ENST00000356537 EEA1Q15075 1411 aa15.17■□□□□ 0.02
CCDC25-201ENST00000356537 CUX1P39880 1505 aa15.17■□□□□ 0.02
CCDC25-201ENST00000356537 HRCP23327 699 aa15.15■□□□□ 0.02
CCDC25-201ENST00000356537 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
CCDC25-201ENST00000356537 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
CCDC25-201ENST00000356537 KIF21BO75037 1637 aa15.12■□□□□ 0.01
CCDC25-201ENST00000356537 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
CCDC25-201ENST00000356537 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
CCDC25-201ENST00000356537 GOLGA3Q08378 1498 aa15.08■□□□□ 0
CCDC25-201ENST00000356537 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ -0
CCDC25-201ENST00000356537 RAPGEF2Q9Y4G8 1499 aa15.05■□□□□ -0
CCDC25-201ENST00000356537 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
CCDC25-201ENST00000356537 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
CCDC25-201ENST00000356537 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
CCDC25-201ENST00000356537 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
CCDC25-201ENST00000356537 NESP48681 1621 aa14.97□□□□□ -0.01
CCDC25-201ENST00000356537 UBTFP17480 764 aaKnown RBP14.97□□□□□ -0.01
CCDC25-201ENST00000356537 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
CCDC25-201ENST00000356537 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
CCDC25-201ENST00000356537 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
CCDC25-201ENST00000356537 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
CCDC25-201ENST00000356537 CLIP1P30622 1438 aa14.87□□□□□ -0.03
CCDC25-201ENST00000356537 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
CCDC25-201ENST00000356537 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
CCDC25-201ENST00000356537 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
CCDC25-201ENST00000356537 CUX2O14529 1486 aa14.82□□□□□ -0.04
CCDC25-201ENST00000356537 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
CCDC25-201ENST00000356537 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
CCDC25-201ENST00000356537 IGF1RP08069 1367 aa14.8□□□□□ -0.04
CCDC25-201ENST00000356537 KIF21AQ7Z4S6 1674 aa14.8□□□□□ -0.04
CCDC25-201ENST00000356537 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
CCDC25-201ENST00000356537 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
CCDC25-201ENST00000356537 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
CCDC25-201ENST00000356537 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
CCDC25-201ENST00000356537 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
CCDC25-201ENST00000356537 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
CCDC25-201ENST00000356537 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
CCDC25-201ENST00000356537 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
CCDC25-201ENST00000356537 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
CCDC25-201ENST00000356537 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
CCDC25-201ENST00000356537 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
CCDC25-201ENST00000356537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
CCDC25-201ENST00000356537 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
CCDC25-201ENST00000356537 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
CCDC25-201ENST00000356537 CUL7Q14999 1698 aa14.61□□□□□ -0.07
CCDC25-201ENST00000356537 CTTNBP2Q8WZ74 1663 aa14.59□□□□□ -0.07
CCDC25-201ENST00000356537 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
CCDC25-201ENST00000356537 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
CCDC25-201ENST00000356537 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
CCDC25-201ENST00000356537 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
CCDC25-201ENST00000356537 GAPVD1Q14C86 1478 aa14.52□□□□□ -0.08
CCDC25-201ENST00000356537 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
CCDC25-201ENST00000356537 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
CCDC25-201ENST00000356537 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms