RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
CSNK1E-211ENST00000451964 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
CSNK1E-211ENST00000451964 ABCC9O60706 1549 aa26.75■■□□□ 1.87
CSNK1E-211ENST00000451964 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
CSNK1E-211ENST00000451964 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
CSNK1E-211ENST00000451964 NACADO15069 1562 aa25.47■■□□□ 1.67
CSNK1E-211ENST00000451964 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
CSNK1E-211ENST00000451964 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
CSNK1E-211ENST00000451964 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
CSNK1E-211ENST00000451964 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
CSNK1E-211ENST00000451964 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
CSNK1E-211ENST00000451964 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
CSNK1E-211ENST00000451964 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
CSNK1E-211ENST00000451964 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
CSNK1E-211ENST00000451964 SHROOM4Q9ULL8 1493 aa24.47■■□□□ 1.51
CSNK1E-211ENST00000451964 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
CSNK1E-211ENST00000451964 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
CSNK1E-211ENST00000451964 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
CSNK1E-211ENST00000451964 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
CSNK1E-211ENST00000451964 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
CSNK1E-211ENST00000451964 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
CSNK1E-211ENST00000451964 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
CSNK1E-211ENST00000451964 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
CSNK1E-211ENST00000451964 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
CSNK1E-211ENST00000451964 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
CSNK1E-211ENST00000451964 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
CSNK1E-211ENST00000451964 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
CSNK1E-211ENST00000451964 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
CSNK1E-211ENST00000451964 NESP48681 1621 aa23.1■■□□□ 1.29
CSNK1E-211ENST00000451964 WIZO95785 1651 aa23.09■■□□□ 1.29
CSNK1E-211ENST00000451964 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
CSNK1E-211ENST00000451964 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
CSNK1E-211ENST00000451964 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
CSNK1E-211ENST00000451964 CUX2O14529 1486 aa22.85■■□□□ 1.25
CSNK1E-211ENST00000451964 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
CSNK1E-211ENST00000451964 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
CSNK1E-211ENST00000451964 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
CSNK1E-211ENST00000451964 CFTRP13569 1480 aa22.69■■□□□ 1.22
CSNK1E-211ENST00000451964 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
CSNK1E-211ENST00000451964 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
CSNK1E-211ENST00000451964 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
CSNK1E-211ENST00000451964 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
CSNK1E-211ENST00000451964 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
CSNK1E-211ENST00000451964 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
CSNK1E-211ENST00000451964 WDR62O43379 1518 aa22.5■■□□□ 1.19
CSNK1E-211ENST00000451964 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
CSNK1E-211ENST00000451964 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
CSNK1E-211ENST00000451964 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
CSNK1E-211ENST00000451964 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
CSNK1E-211ENST00000451964 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
CSNK1E-211ENST00000451964 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
CSNK1E-211ENST00000451964 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
CSNK1E-211ENST00000451964 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
CSNK1E-211ENST00000451964 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
CSNK1E-211ENST00000451964 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CSNK1E-211ENST00000451964 CUX1P39880 1505 aa21.96■■□□□ 1.11
CSNK1E-211ENST00000451964 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
CSNK1E-211ENST00000451964 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
CSNK1E-211ENST00000451964 SOGA1O94964 1423 aa21.95■■□□□ 1.1
CSNK1E-211ENST00000451964 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.17e-13■■■■□ 21.7
CSNK1E-211ENST00000451964 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
CSNK1E-211ENST00000451964 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
CSNK1E-211ENST00000451964 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
CSNK1E-211ENST00000451964 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
CSNK1E-211ENST00000451964 FBLN2P98095 1184 aa21.73■■□□□ 1.07
CSNK1E-211ENST00000451964 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
CSNK1E-211ENST00000451964 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
CSNK1E-211ENST00000451964 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
CSNK1E-211ENST00000451964 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
CSNK1E-211ENST00000451964 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
CSNK1E-211ENST00000451964 WDR97A6NE52 1622 aa21.68■■□□□ 1.06
CSNK1E-211ENST00000451964 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
CSNK1E-211ENST00000451964 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
CSNK1E-211ENST00000451964 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
CSNK1E-211ENST00000451964 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CSNK1E-211ENST00000451964 MAGI1Q96QZ7 1491 aaPredicted RBP21.62■■□□□ 1.05
CSNK1E-211ENST00000451964 CHD1O14646 1710 aa21.6■■□□□ 1.05
CSNK1E-211ENST00000451964 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
CSNK1E-211ENST00000451964 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
CSNK1E-211ENST00000451964 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
CSNK1E-211ENST00000451964 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
CSNK1E-211ENST00000451964 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
CSNK1E-211ENST00000451964 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
CSNK1E-211ENST00000451964 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
CSNK1E-211ENST00000451964 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
CSNK1E-211ENST00000451964 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
CSNK1E-211ENST00000451964 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
CSNK1E-211ENST00000451964 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
CSNK1E-211ENST00000451964 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
CSNK1E-211ENST00000451964 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
CSNK1E-211ENST00000451964 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
CSNK1E-211ENST00000451964 NUP160Q12769 1436 aa21.33■■□□□ 1.01
CSNK1E-211ENST00000451964 IGF1RP08069 1367 aa21.32■■□□□ 1
CSNK1E-211ENST00000451964 KIF27Q86VH2 1401 aa21.3■■□□□ 1
CSNK1E-211ENST00000451964 CEP170Q5SW79 1584 aa21.29■■□□□ 1
CSNK1E-211ENST00000451964 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
CSNK1E-211ENST00000451964 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
CSNK1E-211ENST00000451964 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
CSNK1E-211ENST00000451964 SHROOM2Q13796 1616 aa21.12■□□□□ 0.97
CSNK1E-211ENST00000451964 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms