RNA–Protein interactions for RNA: ENST00000533318.5

SNX19-212, Transcript of sorting nexin 19, humanhuman

TSL 2

Gene SNX19, Length 1,565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-212ENST00000533318 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
SNX19-212ENST00000533318 CCDC180Q9P1Z9 1646 aa37.02■■■■□ 3.52
SNX19-212ENST00000533318 ZCCHC6Q5VYS8 1495 aaKnown RBP35.72■■■■□ 3.31
SNX19-212ENST00000533318 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
SNX19-212ENST00000533318 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
SNX19-212ENST00000533318 ABCC9O60706 1549 aa34.73■■■■□ 3.15
SNX19-212ENST00000533318 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
SNX19-212ENST00000533318 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
SNX19-212ENST00000533318 NACADO15069 1562 aa34.42■■■■□ 3.1
SNX19-212ENST00000533318 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.04
SNX19-212ENST00000533318 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
SNX19-212ENST00000533318 SUPT5HO00267 1087 aaKnown RBP33.37■■■□□ 2.93
SNX19-212ENST00000533318 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
SNX19-212ENST00000533318 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
SNX19-212ENST00000533318 RSF1Q96T23 1441 aaPredicted RBP32.96■■■□□ 2.87
SNX19-212ENST00000533318 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
SNX19-212ENST00000533318 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SNX19-212ENST00000533318 MROH2BQ7Z745 1585 aa32.77■■■□□ 2.84
SNX19-212ENST00000533318 PABPN1Q86U42 306 aaKnown RBP eCLIP32.72■■■□□ 2.83
SNX19-212ENST00000533318 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
SNX19-212ENST00000533318 WIZO95785 1651 aa32.5■■■□□ 2.79
SNX19-212ENST00000533318 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
SNX19-212ENST00000533318 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
SNX19-212ENST00000533318 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
SNX19-212ENST00000533318 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
SNX19-212ENST00000533318 ATAD2BQ9ULI0 1458 aa32.02■■■□□ 2.72
SNX19-212ENST00000533318 EIF4G1Q04637 1599 aaKnown RBP32■■■□□ 2.71
SNX19-212ENST00000533318 CCDC88BA6NC98 1476 aa31.85■■■□□ 2.69
SNX19-212ENST00000533318 BAZ1BQ9UIG0 1483 aaKnown RBP31.85■■■□□ 2.69
SNX19-212ENST00000533318 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
SNX19-212ENST00000533318 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
SNX19-212ENST00000533318 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
SNX19-212ENST00000533318 TRIM41Q8WV44 630 aa31.42■■■□□ 2.62
SNX19-212ENST00000533318 ABCC8Q09428 1581 aa31.21■■■□□ 2.59
SNX19-212ENST00000533318 CFTRP13569 1480 aa31.07■■■□□ 2.56
SNX19-212ENST00000533318 WRNQ14191 1432 aaPredicted RBP eCLIP31.04■■■□□ 2.56
SNX19-212ENST00000533318 PRDM2Q13029 1718 aa30.98■■■□□ 2.55
SNX19-212ENST00000533318 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
SNX19-212ENST00000533318 CADPSQ9ULU8 1353 aa30.91■■■□□ 2.54
SNX19-212ENST00000533318 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
SNX19-212ENST00000533318 TOP2BQ02880 1626 aa30.8■■■□□ 2.52
SNX19-212ENST00000533318 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
SNX19-212ENST00000533318 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
SNX19-212ENST00000533318 FAM9AQ8IZU1 332 aaPredicted RBP30.77■■■□□ 2.52
SNX19-212ENST00000533318 EEA1Q15075 1411 aa30.74■■■□□ 2.51
SNX19-212ENST00000533318 SOGA1O94964 1423 aa30.65■■■□□ 2.5
SNX19-212ENST00000533318 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
SNX19-212ENST00000533318 CUX1P39880 1505 aa30.64■■■□□ 2.5
SNX19-212ENST00000533318 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
SNX19-212ENST00000533318 NESP48681 1621 aa30.53■■■□□ 2.48
SNX19-212ENST00000533318 RUSC2Q8N2Y8 1516 aa30.5■■■□□ 2.47
SNX19-212ENST00000533318 CSRNP3Q8WYN3 585 aa30.46■■■□□ 2.47
SNX19-212ENST00000533318 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
SNX19-212ENST00000533318 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
SNX19-212ENST00000533318 DNMBPQ6XZF7 1577 aa30.36■■■□□ 2.45
SNX19-212ENST00000533318 KIF21BO75037 1637 aa30.32■■■□□ 2.44
SNX19-212ENST00000533318 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
SNX19-212ENST00000533318 GOLGA3Q08378 1498 aa30.28■■■□□ 2.44
SNX19-212ENST00000533318 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
SNX19-212ENST00000533318 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.43
SNX19-212ENST00000533318 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
SNX19-212ENST00000533318 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
SNX19-212ENST00000533318 TNIKQ9UKE5 1360 aa30.21■■■□□ 2.43
SNX19-212ENST00000533318 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
SNX19-212ENST00000533318 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
SNX19-212ENST00000533318 CUX2O14529 1486 aa30.11■■■□□ 2.41
SNX19-212ENST00000533318 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
SNX19-212ENST00000533318 PRXQ9BXM0 1461 aa30.09■■■□□ 2.41
SNX19-212ENST00000533318 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
SNX19-212ENST00000533318 UBTFP17480 764 aaKnown RBP30.04■■■□□ 2.4
SNX19-212ENST00000533318 RAPGEF2Q9Y4G8 1499 aa30.04■■■□□ 2.4
SNX19-212ENST00000533318 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
SNX19-212ENST00000533318 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
SNX19-212ENST00000533318 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
SNX19-212ENST00000533318 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
SNX19-212ENST00000533318 IGF1RP08069 1367 aa29.94■■■□□ 2.38
SNX19-212ENST00000533318 WDR62O43379 1518 aa29.84■■■□□ 2.37
SNX19-212ENST00000533318 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
SNX19-212ENST00000533318 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
SNX19-212ENST00000533318 CARMIL1Q5VZK9 1371 aa29.79■■■□□ 2.36
SNX19-212ENST00000533318 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
SNX19-212ENST00000533318 CLIP1P30622 1438 aa29.78■■■□□ 2.36
SNX19-212ENST00000533318 CUL7Q14999 1698 aa29.77■■■□□ 2.36
SNX19-212ENST00000533318 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
SNX19-212ENST00000533318 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.34
SNX19-212ENST00000533318 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
SNX19-212ENST00000533318 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
SNX19-212ENST00000533318 TRIM26Q12899 539 aaPredicted RBP29.6■■■□□ 2.33
SNX19-212ENST00000533318 VPS8Q8N3P4 1428 aa29.56■■■□□ 2.32
SNX19-212ENST00000533318 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
SNX19-212ENST00000533318 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
SNX19-212ENST00000533318 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
SNX19-212ENST00000533318 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
SNX19-212ENST00000533318 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
SNX19-212ENST00000533318 CTTNBP2Q8WZ74 1663 aa29.44■■■□□ 2.3
SNX19-212ENST00000533318 ARHGAP35Q9NRY4 1499 aa29.43■■■□□ 2.3
SNX19-212ENST00000533318 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
SNX19-212ENST00000533318 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
SNX19-212ENST00000533318 FHAD1B1AJZ9 1412 aa29.41■■■□□ 2.3
SNX19-212ENST00000533318 ADAMTS12P58397 1594 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms