RNA–Protein interactions for RNA: ENST00000523841.5

CCDC25-210, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-210ENST00000523841 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
CCDC25-210ENST00000523841 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
CCDC25-210ENST00000523841 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
CCDC25-210ENST00000523841 ABCC9O60706 1549 aa24.25■■□□□ 1.47
CCDC25-210ENST00000523841 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CCDC25-210ENST00000523841 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
CCDC25-210ENST00000523841 NACADO15069 1562 aa22.98■■□□□ 1.27
CCDC25-210ENST00000523841 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
CCDC25-210ENST00000523841 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
CCDC25-210ENST00000523841 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
CCDC25-210ENST00000523841 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
CCDC25-210ENST00000523841 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
CCDC25-210ENST00000523841 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
CCDC25-210ENST00000523841 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
CCDC25-210ENST00000523841 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.16
CCDC25-210ENST00000523841 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
CCDC25-210ENST00000523841 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
CCDC25-210ENST00000523841 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CCDC25-210ENST00000523841 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
CCDC25-210ENST00000523841 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
CCDC25-210ENST00000523841 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
CCDC25-210ENST00000523841 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
CCDC25-210ENST00000523841 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
CCDC25-210ENST00000523841 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
CCDC25-210ENST00000523841 CUX2O14529 1486 aa21.15■□□□□ 0.98
CCDC25-210ENST00000523841 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
CCDC25-210ENST00000523841 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
CCDC25-210ENST00000523841 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
CCDC25-210ENST00000523841 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
CCDC25-210ENST00000523841 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
CCDC25-210ENST00000523841 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
CCDC25-210ENST00000523841 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
CCDC25-210ENST00000523841 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
CCDC25-210ENST00000523841 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
CCDC25-210ENST00000523841 NESP48681 1621 aa20.74■□□□□ 0.91
CCDC25-210ENST00000523841 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
CCDC25-210ENST00000523841 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
CCDC25-210ENST00000523841 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
CCDC25-210ENST00000523841 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
CCDC25-210ENST00000523841 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
CCDC25-210ENST00000523841 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
CCDC25-210ENST00000523841 WDR62O43379 1518 aa20.41■□□□□ 0.86
CCDC25-210ENST00000523841 WIZO95785 1651 aa20.35■□□□□ 0.85
CCDC25-210ENST00000523841 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
CCDC25-210ENST00000523841 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
CCDC25-210ENST00000523841 CFTRP13569 1480 aa20.23■□□□□ 0.83
CCDC25-210ENST00000523841 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
CCDC25-210ENST00000523841 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
CCDC25-210ENST00000523841 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
CCDC25-210ENST00000523841 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
CCDC25-210ENST00000523841 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
CCDC25-210ENST00000523841 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
CCDC25-210ENST00000523841 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
CCDC25-210ENST00000523841 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
CCDC25-210ENST00000523841 FOXD1Q16676 465 aa19.88■□□□□ 0.77
CCDC25-210ENST00000523841 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
CCDC25-210ENST00000523841 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
CCDC25-210ENST00000523841 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
CCDC25-210ENST00000523841 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
CCDC25-210ENST00000523841 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
CCDC25-210ENST00000523841 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
CCDC25-210ENST00000523841 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
CCDC25-210ENST00000523841 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
CCDC25-210ENST00000523841 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
CCDC25-210ENST00000523841 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
CCDC25-210ENST00000523841 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
CCDC25-210ENST00000523841 CHD1O14646 1710 aa19.64■□□□□ 0.73
CCDC25-210ENST00000523841 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
CCDC25-210ENST00000523841 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■■■ 32.8
CCDC25-210ENST00000523841 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
CCDC25-210ENST00000523841 SOGA1O94964 1423 aa19.51■□□□□ 0.71
CCDC25-210ENST00000523841 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
CCDC25-210ENST00000523841 FBLN2P98095 1184 aa19.49■□□□□ 0.71
CCDC25-210ENST00000523841 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
CCDC25-210ENST00000523841 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
CCDC25-210ENST00000523841 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
CCDC25-210ENST00000523841 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
CCDC25-210ENST00000523841 SNAPC4Q5SXM2 1469 aa19.44■□□□□ 0.7
CCDC25-210ENST00000523841 CLASP1Q7Z460 1538 aa19.43■□□□□ 0.7
CCDC25-210ENST00000523841 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
CCDC25-210ENST00000523841 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
CCDC25-210ENST00000523841 CUX1P39880 1505 aa19.39■□□□□ 0.69
CCDC25-210ENST00000523841 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
CCDC25-210ENST00000523841 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
CCDC25-210ENST00000523841 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CCDC25-210ENST00000523841 CHMP7Q8WUX9 453 aaPredicted RBP19.38■□□□□ 0.69
CCDC25-210ENST00000523841 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
CCDC25-210ENST00000523841 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
CCDC25-210ENST00000523841 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
CCDC25-210ENST00000523841 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
CCDC25-210ENST00000523841 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
CCDC25-210ENST00000523841 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
CCDC25-210ENST00000523841 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
CCDC25-210ENST00000523841 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
CCDC25-210ENST00000523841 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
CCDC25-210ENST00000523841 NUP160Q12769 1436 aa19.1■□□□□ 0.65
CCDC25-210ENST00000523841 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
CCDC25-210ENST00000523841 ERICH3Q5RHP9 1530 aa19.07■□□□□ 0.64
CCDC25-210ENST00000523841 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
CCDC25-210ENST00000523841 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms