RNA–Protein interactions for RNA: ENST00000400788.8

TMEM242-202, Transcript of transmembrane protein 242, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM242, Length 4,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM242-202ENST00000400788 NISCHQ9Y2I1 1504 aa18.76■□□□□ 0.59
TMEM242-202ENST00000400788 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
TMEM242-202ENST00000400788 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
TMEM242-202ENST00000400788 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
TMEM242-202ENST00000400788 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
TMEM242-202ENST00000400788 ABCC9O60706 1549 aa15.78■□□□□ 0.12
TMEM242-202ENST00000400788 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
TMEM242-202ENST00000400788 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
TMEM242-202ENST00000400788 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
TMEM242-202ENST00000400788 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
TMEM242-202ENST00000400788 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
TMEM242-202ENST00000400788 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM242-202ENST00000400788 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
TMEM242-202ENST00000400788 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
TMEM242-202ENST00000400788 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
TMEM242-202ENST00000400788 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
TMEM242-202ENST00000400788 RANGAP1P46060 587 aaPredicted RBP15.19■□□□□ 0.02
TMEM242-202ENST00000400788 PPARGC1BQ86YN6 1023 aaKnown RBP15.13■□□□□ 0.01
TMEM242-202ENST00000400788 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
TMEM242-202ENST00000400788 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
TMEM242-202ENST00000400788 APLP2Q06481 763 aa14.92□□□□□ -0.02
TMEM242-202ENST00000400788 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
TMEM242-202ENST00000400788 NACADO15069 1562 aa14.87□□□□□ -0.03
TMEM242-202ENST00000400788 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
TMEM242-202ENST00000400788 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
TMEM242-202ENST00000400788 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
TMEM242-202ENST00000400788 TRIM26Q12899 539 aaPredicted RBP14.8□□□□□ -0.04
TMEM242-202ENST00000400788 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
TMEM242-202ENST00000400788 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
TMEM242-202ENST00000400788 HRCP23327 699 aa14.68□□□□□ -0.06
TMEM242-202ENST00000400788 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
TMEM242-202ENST00000400788 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
TMEM242-202ENST00000400788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
TMEM242-202ENST00000400788 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
TMEM242-202ENST00000400788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
TMEM242-202ENST00000400788 ZEB1P37275 1124 aaPredicted RBP14.5□□□□□ -0.09
TMEM242-202ENST00000400788 ITGAEP38570 1179 aa14.5□□□□□ -0.09
TMEM242-202ENST00000400788 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
TMEM242-202ENST00000400788 WIZO95785 1651 aa14.48□□□□□ -0.09
TMEM242-202ENST00000400788 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
TMEM242-202ENST00000400788 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
TMEM242-202ENST00000400788 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
TMEM242-202ENST00000400788 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
TMEM242-202ENST00000400788 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
TMEM242-202ENST00000400788 SOGA1O94964 1423 aa14.28□□□□□ -0.12
TMEM242-202ENST00000400788 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
TMEM242-202ENST00000400788 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
TMEM242-202ENST00000400788 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
TMEM242-202ENST00000400788 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
TMEM242-202ENST00000400788 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
TMEM242-202ENST00000400788 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
TMEM242-202ENST00000400788 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
TMEM242-202ENST00000400788 FBLN2P98095 1184 aa14.18□□□□□ -0.14
TMEM242-202ENST00000400788 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
TMEM242-202ENST00000400788 MYT1Q01538 1121 aa14.12□□□□□ -0.15
TMEM242-202ENST00000400788 CLIP1P30622 1438 aa14.12□□□□□ -0.15
TMEM242-202ENST00000400788 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
TMEM242-202ENST00000400788 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
TMEM242-202ENST00000400788 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
TMEM242-202ENST00000400788 ERICH6Q7L0X2 663 aa14.08□□□□□ -0.15
TMEM242-202ENST00000400788 EEA1Q15075 1411 aa14.08□□□□□ -0.15
TMEM242-202ENST00000400788 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
TMEM242-202ENST00000400788 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
TMEM242-202ENST00000400788 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
TMEM242-202ENST00000400788 KIF27Q86VH2 1401 aa14□□□□□ -0.17
TMEM242-202ENST00000400788 DIEXFQ68CQ4 756 aaKnown RBP13.99□□□□□ -0.17
TMEM242-202ENST00000400788 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
TMEM242-202ENST00000400788 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
TMEM242-202ENST00000400788 CUX2O14529 1486 aa13.94□□□□□ -0.18
TMEM242-202ENST00000400788 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
TMEM242-202ENST00000400788 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
TMEM242-202ENST00000400788 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
TMEM242-202ENST00000400788 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
TMEM242-202ENST00000400788 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
TMEM242-202ENST00000400788 CNGB1Q14028 1251 aaPredicted RBP13.84□□□□□ -0.19
TMEM242-202ENST00000400788 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
TMEM242-202ENST00000400788 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
TMEM242-202ENST00000400788 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
TMEM242-202ENST00000400788 KANK4Q5T7N3 995 aaPredicted RBP13.83□□□□□ -0.2
TMEM242-202ENST00000400788 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
TMEM242-202ENST00000400788 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
TMEM242-202ENST00000400788 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
TMEM242-202ENST00000400788 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
TMEM242-202ENST00000400788 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
TMEM242-202ENST00000400788 VPS8Q8N3P4 1428 aa13.78□□□□□ -0.2
TMEM242-202ENST00000400788 SYNJ1O43426 1573 aa13.77□□□□□ -0.2
TMEM242-202ENST00000400788 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
TMEM242-202ENST00000400788 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.21
TMEM242-202ENST00000400788 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.21
TMEM242-202ENST00000400788 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
TMEM242-202ENST00000400788 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
TMEM242-202ENST00000400788 NEFLP07196 543 aa13.71□□□□□ -0.21
TMEM242-202ENST00000400788 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
TMEM242-202ENST00000400788 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
TMEM242-202ENST00000400788 NESP48681 1621 aa13.69□□□□□ -0.22
TMEM242-202ENST00000400788 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
TMEM242-202ENST00000400788 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
TMEM242-202ENST00000400788 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
TMEM242-202ENST00000400788 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
TMEM242-202ENST00000400788 CFTRP13569 1480 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms