RNA–Protein interactions for RNA: ENST00000519509.5

CCDC25-204, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-204ENST00000519509 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
CCDC25-204ENST00000519509 NISCHQ9Y2I1 1504 aa24.67■■□□□ 1.54
CCDC25-204ENST00000519509 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CCDC25-204ENST00000519509 ABCC9O60706 1549 aa22.71■■□□□ 1.23
CCDC25-204ENST00000519509 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
CCDC25-204ENST00000519509 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
CCDC25-204ENST00000519509 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
CCDC25-204ENST00000519509 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
CCDC25-204ENST00000519509 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
CCDC25-204ENST00000519509 NACADO15069 1562 aa21.19■□□□□ 0.98
CCDC25-204ENST00000519509 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
CCDC25-204ENST00000519509 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCDC25-204ENST00000519509 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
CCDC25-204ENST00000519509 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
CCDC25-204ENST00000519509 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
CCDC25-204ENST00000519509 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
CCDC25-204ENST00000519509 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
CCDC25-204ENST00000519509 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
CCDC25-204ENST00000519509 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
CCDC25-204ENST00000519509 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
CCDC25-204ENST00000519509 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
CCDC25-204ENST00000519509 DNAJC5Q9H3Z4 198 aa20.32■□□□□ 0.84
CCDC25-204ENST00000519509 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
CCDC25-204ENST00000519509 FOXD1Q16676 465 aa19.88■□□□□ 0.77
CCDC25-204ENST00000519509 CUX2O14529 1486 aa19.78■□□□□ 0.76
CCDC25-204ENST00000519509 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
CCDC25-204ENST00000519509 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
CCDC25-204ENST00000519509 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
CCDC25-204ENST00000519509 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
CCDC25-204ENST00000519509 THOC2Q8NI27 1593 aaKnown RBP19.44■□□□□ 0.7
CCDC25-204ENST00000519509 NESP48681 1621 aa19.4■□□□□ 0.7
CCDC25-204ENST00000519509 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
CCDC25-204ENST00000519509 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CCDC25-204ENST00000519509 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CCDC25-204ENST00000519509 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
CCDC25-204ENST00000519509 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
CCDC25-204ENST00000519509 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
CCDC25-204ENST00000519509 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
CCDC25-204ENST00000519509 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
CCDC25-204ENST00000519509 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
CCDC25-204ENST00000519509 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
CCDC25-204ENST00000519509 WDR62O43379 1518 aa19■□□□□ 0.63
CCDC25-204ENST00000519509 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
CCDC25-204ENST00000519509 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
CCDC25-204ENST00000519509 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
CCDC25-204ENST00000519509 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CCDC25-204ENST00000519509 WIZO95785 1651 aa18.79■□□□□ 0.6
CCDC25-204ENST00000519509 ADRA2BP18089 450 aa18.77■□□□□ 0.6
CCDC25-204ENST00000519509 CEP164Q9UPV0 1460 aa18.75■□□□□ 0.59
CCDC25-204ENST00000519509 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
CCDC25-204ENST00000519509 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
CCDC25-204ENST00000519509 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
CCDC25-204ENST00000519509 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
CCDC25-204ENST00000519509 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
CCDC25-204ENST00000519509 CFTRP13569 1480 aa18.65■□□□□ 0.58
CCDC25-204ENST00000519509 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
CCDC25-204ENST00000519509 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
CCDC25-204ENST00000519509 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
CCDC25-204ENST00000519509 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
CCDC25-204ENST00000519509 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CCDC25-204ENST00000519509 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
CCDC25-204ENST00000519509 MSH5O43196 834 aa18.45■□□□□ 0.54
CCDC25-204ENST00000519509 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
CCDC25-204ENST00000519509 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
CCDC25-204ENST00000519509 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
CCDC25-204ENST00000519509 CHD1O14646 1710 aa18.35■□□□□ 0.53
CCDC25-204ENST00000519509 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
CCDC25-204ENST00000519509 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
CCDC25-204ENST00000519509 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
CCDC25-204ENST00000519509 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
CCDC25-204ENST00000519509 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
CCDC25-204ENST00000519509 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
CCDC25-204ENST00000519509 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
CCDC25-204ENST00000519509 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■■ 32.8
CCDC25-204ENST00000519509 ABCC8Q09428 1581 aa18.16■□□□□ 0.5
CCDC25-204ENST00000519509 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
CCDC25-204ENST00000519509 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
CCDC25-204ENST00000519509 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
CCDC25-204ENST00000519509 FBLN2P98095 1184 aa18.04■□□□□ 0.48
CCDC25-204ENST00000519509 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
CCDC25-204ENST00000519509 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
CCDC25-204ENST00000519509 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
CCDC25-204ENST00000519509 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
CCDC25-204ENST00000519509 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
CCDC25-204ENST00000519509 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
CCDC25-204ENST00000519509 PBRM1Q86U86 1689 aa17.92■□□□□ 0.46
CCDC25-204ENST00000519509 CUX1P39880 1505 aa17.92■□□□□ 0.46
CCDC25-204ENST00000519509 SOGA1O94964 1423 aa17.91■□□□□ 0.46
CCDC25-204ENST00000519509 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
CCDC25-204ENST00000519509 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
CCDC25-204ENST00000519509 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
CCDC25-204ENST00000519509 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
CCDC25-204ENST00000519509 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
CCDC25-204ENST00000519509 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.44
CCDC25-204ENST00000519509 KIF13AQ9H1H9 1805 aa17.74■□□□□ 0.43
CCDC25-204ENST00000519509 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
CCDC25-204ENST00000519509 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
CCDC25-204ENST00000519509 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
CCDC25-204ENST00000519509 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
CCDC25-204ENST00000519509 NUP160Q12769 1436 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms