RNA–Protein interactions for RNA: ENST00000524460.1

SNX19-203, Transcript of sorting nexin 19, humanhuman

TSL 5

Gene SNX19, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-203ENST00000524460 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
SNX19-203ENST00000524460 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
SNX19-203ENST00000524460 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
SNX19-203ENST00000524460 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
SNX19-203ENST00000524460 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
SNX19-203ENST00000524460 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
SNX19-203ENST00000524460 ABCC9O60706 1549 aa18.81■□□□□ 0.6
SNX19-203ENST00000524460 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
SNX19-203ENST00000524460 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
SNX19-203ENST00000524460 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
SNX19-203ENST00000524460 NACADO15069 1562 aa18.3■□□□□ 0.52
SNX19-203ENST00000524460 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
SNX19-203ENST00000524460 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
SNX19-203ENST00000524460 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
SNX19-203ENST00000524460 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
SNX19-203ENST00000524460 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
SNX19-203ENST00000524460 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
SNX19-203ENST00000524460 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX19-203ENST00000524460 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
SNX19-203ENST00000524460 FOXD1Q16676 465 aa17.62■□□□□ 0.41
SNX19-203ENST00000524460 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
SNX19-203ENST00000524460 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
SNX19-203ENST00000524460 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
SNX19-203ENST00000524460 MROH2BQ7Z745 1585 aa17.22■□□□□ 0.35
SNX19-203ENST00000524460 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
SNX19-203ENST00000524460 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
SNX19-203ENST00000524460 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SNX19-203ENST00000524460 WIZO95785 1651 aa17.09■□□□□ 0.33
SNX19-203ENST00000524460 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
SNX19-203ENST00000524460 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
SNX19-203ENST00000524460 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
SNX19-203ENST00000524460 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
SNX19-203ENST00000524460 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
SNX19-203ENST00000524460 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
SNX19-203ENST00000524460 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
SNX19-203ENST00000524460 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
SNX19-203ENST00000524460 ADRA2BP18089 450 aa16.83■□□□□ 0.28
SNX19-203ENST00000524460 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
SNX19-203ENST00000524460 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
SNX19-203ENST00000524460 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
SNX19-203ENST00000524460 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
SNX19-203ENST00000524460 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
SNX19-203ENST00000524460 CFTRP13569 1480 aa16.41■□□□□ 0.22
SNX19-203ENST00000524460 NESP48681 1621 aa16.41■□□□□ 0.22
SNX19-203ENST00000524460 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
SNX19-203ENST00000524460 MSH5O43196 834 aa16.37■□□□□ 0.21
SNX19-203ENST00000524460 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
SNX19-203ENST00000524460 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
SNX19-203ENST00000524460 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.19
SNX19-203ENST00000524460 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
SNX19-203ENST00000524460 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
SNX19-203ENST00000524460 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
SNX19-203ENST00000524460 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
SNX19-203ENST00000524460 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
SNX19-203ENST00000524460 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
SNX19-203ENST00000524460 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
SNX19-203ENST00000524460 CUX1P39880 1505 aa16.13■□□□□ 0.17
SNX19-203ENST00000524460 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
SNX19-203ENST00000524460 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
SNX19-203ENST00000524460 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
SNX19-203ENST00000524460 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
SNX19-203ENST00000524460 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
SNX19-203ENST00000524460 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
SNX19-203ENST00000524460 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
SNX19-203ENST00000524460 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
SNX19-203ENST00000524460 WDR62O43379 1518 aa15.99■□□□□ 0.15
SNX19-203ENST00000524460 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
SNX19-203ENST00000524460 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
SNX19-203ENST00000524460 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
SNX19-203ENST00000524460 SOGA1O94964 1423 aa15.89■□□□□ 0.13
SNX19-203ENST00000524460 CUX2O14529 1486 aa15.86■□□□□ 0.13
SNX19-203ENST00000524460 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
SNX19-203ENST00000524460 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
SNX19-203ENST00000524460 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
SNX19-203ENST00000524460 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
SNX19-203ENST00000524460 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
SNX19-203ENST00000524460 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
SNX19-203ENST00000524460 EEA1Q15075 1411 aa15.8■□□□□ 0.12
SNX19-203ENST00000524460 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
SNX19-203ENST00000524460 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
SNX19-203ENST00000524460 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
SNX19-203ENST00000524460 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
SNX19-203ENST00000524460 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
SNX19-203ENST00000524460 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
SNX19-203ENST00000524460 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
SNX19-203ENST00000524460 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX19-203ENST00000524460 PBRM1Q86U86 1689 aa15.71■□□□□ 0.11
SNX19-203ENST00000524460 IGF1RP08069 1367 aa15.65■□□□□ 0.1
SNX19-203ENST00000524460 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
SNX19-203ENST00000524460 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
SNX19-203ENST00000524460 LOC105371045A0A1W2PR82 267 aa15.64■□□□□ 0.09
SNX19-203ENST00000524460 KIF21BO75037 1637 aa15.64■□□□□ 0.09
SNX19-203ENST00000524460 CUL7Q14999 1698 aa15.63■□□□□ 0.09
SNX19-203ENST00000524460 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
SNX19-203ENST00000524460 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
SNX19-203ENST00000524460 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
SNX19-203ENST00000524460 PRXQ9BXM0 1461 aa15.6■□□□□ 0.09
SNX19-203ENST00000524460 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
SNX19-203ENST00000524460 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
SNX19-203ENST00000524460 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms