RNA–Protein interactions for RNA: ENST00000595200.5

LIN7B-207, Transcript of lin-7 homolog B, crumbs cell polarity complex component, humanhuman

TSL 3

Gene LIN7B, Length 795 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7B-207ENST00000595200 NISCHQ9Y2I1 1504 aa54.68■■■■■ 6.34
LIN7B-207ENST00000595200 CCDC180Q9P1Z9 1646 aa48.72■■■■■ 5.39
LIN7B-207ENST00000595200 ABCC9O60706 1549 aa48■■■■■ 5.27
LIN7B-207ENST00000595200 RB1CC1Q8TDY2 1594 aa45.98■■■■■ 4.95
LIN7B-207ENST00000595200 NACADO15069 1562 aa45.86■■■■■ 4.93
LIN7B-207ENST00000595200 DCAF8L2P0C7V8 631 aa45.73■■■■■ 4.91
LIN7B-207ENST00000595200 MYO15BQ96JP2 1530 aa45.5■■■■■ 4.87
LIN7B-207ENST00000595200 ZCCHC6Q5VYS8 1495 aaKnown RBP45.49■■■■■ 4.87
LIN7B-207ENST00000595200 DCAF1Q9Y4B6 1507 aa45.21■■■■■ 4.83
LIN7B-207ENST00000595200 UNC13AQ9UPW8 1703 aa45.04■■■■■ 4.8
LIN7B-207ENST00000595200 PABPN1Q86U42 306 aaKnown RBP eCLIP44.81■■■■■ 4.76
LIN7B-207ENST00000595200 BICRAQ9NZM4 1560 aa44.72■■■■■ 4.75
LIN7B-207ENST00000595200 SCRIBQ14160 1630 aa44.46■■■■■ 4.71
LIN7B-207ENST00000595200 DNAJC5BQ9UF47 199 aa44.43■■■■■ 4.7
LIN7B-207ENST00000595200 SHROOM4Q9ULL8 1493 aa44.08■■■■■ 4.65
LIN7B-207ENST00000595200 EIF4G1Q04637 1599 aaKnown RBP43.5■■■■■ 4.55
LIN7B-207ENST00000595200 CC2D2AQ9P2K1 1620 aa43.41■■■■■ 4.54
LIN7B-207ENST00000595200 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
LIN7B-207ENST00000595200 SMARCA4P51532 1647 aa42.49■■■■■ 4.39
LIN7B-207ENST00000595200 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
LIN7B-207ENST00000595200 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
LIN7B-207ENST00000595200 ATAD2BQ9ULI0 1458 aa42.35■■■■■ 4.37
LIN7B-207ENST00000595200 SMARCA2P51531 1590 aa42.22■■■■■ 4.35
LIN7B-207ENST00000595200 MROH2BQ7Z745 1585 aa42.18■■■■■ 4.34
LIN7B-207ENST00000595200 HMGXB3Q12766 1538 aa42.1■■■■■ 4.33
LIN7B-207ENST00000595200 PEG3Q9GZU2 1588 aa42.09■■■■■ 4.33
LIN7B-207ENST00000595200 BAZ1BQ9UIG0 1483 aaKnown RBP41.93■■■■■ 4.3
LIN7B-207ENST00000595200 WIZO95785 1651 aa41.7■■■■■ 4.27
LIN7B-207ENST00000595200 RSF1Q96T23 1441 aaPredicted RBP41.56■■■■■ 4.24
LIN7B-207ENST00000595200 NESP48681 1621 aa41.49■■■■■ 4.23
LIN7B-207ENST00000595200 ERCC6Q03468 1493 aa41.32■■■■■ 4.2
LIN7B-207ENST00000595200 LAMC3Q9Y6N6 1575 aa41.25■■■■■ 4.19
LIN7B-207ENST00000595200 TOP2AP11388 1531 aaKnown RBP41.19■■■■■ 4.18
LIN7B-207ENST00000595200 CADPSQ9ULU8 1353 aa41.1■■■■■ 4.17
LIN7B-207ENST00000595200 CUX2O14529 1486 aa41.02■■■■■ 4.16
LIN7B-207ENST00000595200 PDS5BQ9NTI5 1447 aa40.96■■■■■ 4.15
LIN7B-207ENST00000595200 KIF21AQ7Z4S6 1674 aa40.96■■■■■ 4.15
LIN7B-207ENST00000595200 THOC2Q8NI27 1593 aaKnown RBP40.91■■■■■ 4.14
LIN7B-207ENST00000595200 CFTRP13569 1480 aa40.8■■■■■ 4.12
LIN7B-207ENST00000595200 CCDC88BA6NC98 1476 aa40.74■■■■■ 4.11
LIN7B-207ENST00000595200 FANCD2Q9BXW9 1451 aa40.62■■■■■ 4.09
LIN7B-207ENST00000595200 MRC2Q9UBG0 1479 aa40.6■■■■■ 4.09
LIN7B-207ENST00000595200 CEP164Q9UPV0 1460 aa40.58■■■■■ 4.09
LIN7B-207ENST00000595200 WDR62O43379 1518 aa40.51■■■■■ 4.08
LIN7B-207ENST00000595200 PRDM2Q13029 1718 aa40.45■■■■■ 4.07
LIN7B-207ENST00000595200 URB2Q14146 1524 aaKnown RBP40.29■■■■■ 4.04
LIN7B-207ENST00000595200 SUPT5HO00267 1087 aaKnown RBP40.21■■■■■ 4.03
LIN7B-207ENST00000595200 DNAJC5Q9H3Z4 198 aa40.16■■■■■ 4.02
LIN7B-207ENST00000595200 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
LIN7B-207ENST00000595200 DNMBPQ6XZF7 1577 aa39.87■■■■□ 3.97
LIN7B-207ENST00000595200 ABCC8Q09428 1581 aa39.84■■■■□ 3.97
LIN7B-207ENST00000595200 IFT140Q96RY7 1462 aa39.75■■■■□ 3.95
LIN7B-207ENST00000595200 ZNF608Q9ULD9 1512 aaPredicted RBP39.67■■■■□ 3.94
LIN7B-207ENST00000595200 POLA1P09884 1462 aaPredicted RBP39.6■■■■□ 3.93
LIN7B-207ENST00000595200 TARBP1Q13395 1621 aaKnown RBP39.58■■■■□ 3.93
LIN7B-207ENST00000595200 CUX1P39880 1505 aa39.57■■■■□ 3.93
LIN7B-207ENST00000595200 EIF4G3O43432 1585 aaKnown RBP39.46■■■■□ 3.91
LIN7B-207ENST00000595200 RAD54L2Q9Y4B4 1467 aa39.46■■■■□ 3.91
LIN7B-207ENST00000595200 FGD5Q6ZNL6 1462 aa39.45■■■■□ 3.91
LIN7B-207ENST00000595200 SOGA1O94964 1423 aa39.4■■■■□ 3.9
LIN7B-207ENST00000595200 AQRO60306 1485 aaKnown RBP eCLIP39.39■■■■□ 3.96e-7■■■■■ 41.6
LIN7B-207ENST00000595200 TDRD9Q8NDG6 1382 aaKnown RBP39.25■■■■□ 3.87
LIN7B-207ENST00000595200 OSCARQ8IYS5 282 aa39.25■■■■□ 3.87
LIN7B-207ENST00000595200 WDR97A6NE52 1622 aa39.17■■■■□ 3.86
LIN7B-207ENST00000595200 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
LIN7B-207ENST00000595200 SYNJ1O43426 1573 aa39.13■■■■□ 3.85
LIN7B-207ENST00000595200 TOP2BQ02880 1626 aa39.12■■■■□ 3.85
LIN7B-207ENST00000595200 BIVM-ERCC5R4GMW8 1640 aa39.12■■■■□ 3.85
LIN7B-207ENST00000595200 ABCA10Q8WWZ4 1543 aa39.06■■■■□ 3.84
LIN7B-207ENST00000595200 CHD1O14646 1710 aa39.03■■■■□ 3.84
LIN7B-207ENST00000595200 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
LIN7B-207ENST00000595200 GRIN2BQ13224 1484 aa38.97■■■■□ 3.83
LIN7B-207ENST00000595200 ABCA5Q8WWZ7 1642 aa38.95■■■■□ 3.83
LIN7B-207ENST00000595200 GAPVD1Q14C86 1478 aa38.94■■■■□ 3.82
LIN7B-207ENST00000595200 MAGI1Q96QZ7 1491 aaPredicted RBP38.9■■■■□ 3.82
LIN7B-207ENST00000595200 PBRM1Q86U86 1689 aa38.9■■■■□ 3.82
LIN7B-207ENST00000595200 FBLN2P98095 1184 aa38.89■■■■□ 3.82
LIN7B-207ENST00000595200 SYNJ2O15056 1496 aa38.76■■■■□ 3.8
LIN7B-207ENST00000595200 CHMP7Q8WUX9 453 aaPredicted RBP38.73■■■■□ 3.79
LIN7B-207ENST00000595200 RIMBP3CA6NJZ7 1639 aa38.73■■■■□ 3.79
LIN7B-207ENST00000595200 RIMBP3BA6NNM3 1639 aa38.73■■■■□ 3.79
LIN7B-207ENST00000595200 RIMBP3Q9UFD9 1639 aa38.73■■■■□ 3.79
LIN7B-207ENST00000595200 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
LIN7B-207ENST00000595200 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
LIN7B-207ENST00000595200 CLASP1Q7Z460 1538 aa38.62■■■■□ 3.77
LIN7B-207ENST00000595200 ADAMTS12P58397 1594 aa38.59■■■■□ 3.77
LIN7B-207ENST00000595200 ERICH3Q5RHP9 1530 aa38.56■■■■□ 3.76
LIN7B-207ENST00000595200 GRIN2AQ12879 1464 aa38.48■■■■□ 3.75
LIN7B-207ENST00000595200 FHAD1B1AJZ9 1412 aa38.47■■■■□ 3.75
LIN7B-207ENST00000595200 ARAP1Q96P48 1450 aa38.37■■■■□ 3.73
LIN7B-207ENST00000595200 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
LIN7B-207ENST00000595200 NUP160Q12769 1436 aa38.35■■■■□ 3.73
LIN7B-207ENST00000595200 KIF27Q86VH2 1401 aa38.31■■■■□ 3.72
LIN7B-207ENST00000595200 CYB5RLQ6IPT4 315 aa38.3■■■■□ 3.72
LIN7B-207ENST00000595200 IGF1RP08069 1367 aa38.28■■■■□ 3.72
LIN7B-207ENST00000595200 CUL7Q14999 1698 aa38.13■■■■□ 3.69
LIN7B-207ENST00000595200 SHROOM2Q13796 1616 aa38.12■■■■□ 3.69
LIN7B-207ENST00000595200 ERCC6L2Q5T890 1561 aa38.11■■■■□ 3.69
LIN7B-207ENST00000595200 RUSC2Q8N2Y8 1516 aa38.02■■■■□ 3.68
LIN7B-207ENST00000595200 CARMIL1Q5VZK9 1371 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms