RNA–Protein interactions for RNA: ENST00000374524.1

PITHD1-202, Transcript of PITH domain containing 1, humanhuman

TSL 3 BASIC

Gene PITHD1, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITHD1-202ENST00000374524 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
PITHD1-202ENST00000374524 CCDC180Q9P1Z9 1646 aa28.77■■■□□ 2.2
PITHD1-202ENST00000374524 ABCC9O60706 1549 aa28.75■■■□□ 2.19
PITHD1-202ENST00000374524 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
PITHD1-202ENST00000374524 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
PITHD1-202ENST00000374524 NACADO15069 1562 aa27.26■■□□□ 1.95
PITHD1-202ENST00000374524 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
PITHD1-202ENST00000374524 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
PITHD1-202ENST00000374524 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
PITHD1-202ENST00000374524 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
PITHD1-202ENST00000374524 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
PITHD1-202ENST00000374524 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
PITHD1-202ENST00000374524 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
PITHD1-202ENST00000374524 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
PITHD1-202ENST00000374524 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
PITHD1-202ENST00000374524 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
PITHD1-202ENST00000374524 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
PITHD1-202ENST00000374524 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
PITHD1-202ENST00000374524 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
PITHD1-202ENST00000374524 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.61
PITHD1-202ENST00000374524 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
PITHD1-202ENST00000374524 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
PITHD1-202ENST00000374524 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
PITHD1-202ENST00000374524 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PITHD1-202ENST00000374524 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
PITHD1-202ENST00000374524 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
PITHD1-202ENST00000374524 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
PITHD1-202ENST00000374524 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
PITHD1-202ENST00000374524 NESP48681 1621 aa24.72■■□□□ 1.55
PITHD1-202ENST00000374524 CUX2O14529 1486 aa24.69■■□□□ 1.54
PITHD1-202ENST00000374524 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
PITHD1-202ENST00000374524 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
PITHD1-202ENST00000374524 WIZO95785 1651 aa24.53■■□□□ 1.52
PITHD1-202ENST00000374524 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
PITHD1-202ENST00000374524 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
PITHD1-202ENST00000374524 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
PITHD1-202ENST00000374524 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
PITHD1-202ENST00000374524 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
PITHD1-202ENST00000374524 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
PITHD1-202ENST00000374524 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
PITHD1-202ENST00000374524 CFTRP13569 1480 aa24.19■■□□□ 1.46
PITHD1-202ENST00000374524 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
PITHD1-202ENST00000374524 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
PITHD1-202ENST00000374524 WDR62O43379 1518 aa24.1■■□□□ 1.45
PITHD1-202ENST00000374524 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
PITHD1-202ENST00000374524 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
PITHD1-202ENST00000374524 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
PITHD1-202ENST00000374524 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
PITHD1-202ENST00000374524 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
PITHD1-202ENST00000374524 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
PITHD1-202ENST00000374524 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
PITHD1-202ENST00000374524 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
PITHD1-202ENST00000374524 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
PITHD1-202ENST00000374524 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
PITHD1-202ENST00000374524 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
PITHD1-202ENST00000374524 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.355e-10■□□□□ 8.1
PITHD1-202ENST00000374524 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
PITHD1-202ENST00000374524 SOGA1O94964 1423 aa23.45■■□□□ 1.34
PITHD1-202ENST00000374524 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
PITHD1-202ENST00000374524 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
PITHD1-202ENST00000374524 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
PITHD1-202ENST00000374524 FBLN2P98095 1184 aa23.4■■□□□ 1.34
PITHD1-202ENST00000374524 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
PITHD1-202ENST00000374524 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
PITHD1-202ENST00000374524 CUX1P39880 1505 aa23.33■■□□□ 1.33
PITHD1-202ENST00000374524 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
PITHD1-202ENST00000374524 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
PITHD1-202ENST00000374524 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
PITHD1-202ENST00000374524 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
PITHD1-202ENST00000374524 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
PITHD1-202ENST00000374524 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
PITHD1-202ENST00000374524 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
PITHD1-202ENST00000374524 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
PITHD1-202ENST00000374524 CHD1O14646 1710 aa23.18■■□□□ 1.3
PITHD1-202ENST00000374524 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
PITHD1-202ENST00000374524 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
PITHD1-202ENST00000374524 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
PITHD1-202ENST00000374524 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.296e-8■■□□□ 11.5
PITHD1-202ENST00000374524 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
PITHD1-202ENST00000374524 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
PITHD1-202ENST00000374524 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
PITHD1-202ENST00000374524 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
PITHD1-202ENST00000374524 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
PITHD1-202ENST00000374524 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
PITHD1-202ENST00000374524 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
PITHD1-202ENST00000374524 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
PITHD1-202ENST00000374524 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
PITHD1-202ENST00000374524 TRHP20396 242 aaPredicted RBP22.9■■□□□ 1.26
PITHD1-202ENST00000374524 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
PITHD1-202ENST00000374524 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
PITHD1-202ENST00000374524 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
PITHD1-202ENST00000374524 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
PITHD1-202ENST00000374524 NUP160Q12769 1436 aa22.77■■□□□ 1.24
PITHD1-202ENST00000374524 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
PITHD1-202ENST00000374524 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
PITHD1-202ENST00000374524 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
PITHD1-202ENST00000374524 IGF1RP08069 1367 aa22.63■■□□□ 1.21
PITHD1-202ENST00000374524 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
PITHD1-202ENST00000374524 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
PITHD1-202ENST00000374524 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms