Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 GIT2-208ENST00000547694 667 ntTSL 36.54□□□□□ -1.364e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZNF563-204ENST00000601858 564 ntTSL 55.57□□□□□ -1.524e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZNF563-202ENST00000594577 749 ntTSL 55.35□□□□□ -1.554e-6■■□□□ 13.5
PRPF8Q6P2Q9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.61□□□□□ -1.674e-6■■□□□ 13.5
PRPF8Q6P2Q9 MIR6758-201ENST00000620653 63 ntBASIC4.5□□□□□ -1.692e-11■■□□□ 13.5
PRPF8Q6P2Q9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.89□□□□□ -1.954e-6■■□□□ 13.5
PRPF8Q6P2Q9 DCTN4-209ENST00000520195 376 ntTSL 51.66□□□□□ -2.142e-11■■□□□ 13.5
PRPF8Q6P2Q9 SPTAN1-216ENST00000629047 401 ntTSL 21.16□□□□□ -2.224e-6■■□□□ 13.5
PRPF8Q6P2Q9 DDX41-213ENST00000512027 583 ntTSL 414.08□□□□□ -0.162e-6■■□□□ 13.5
PRPF8Q6P2Q9 RAB17-207ENST00000416106 587 ntTSL 312.64□□□□□ -0.397e-13■■□□□ 13.5
PRPF8Q6P2Q9 TRAM1-204ENST00000521049 872 ntTSL 514.4□□□□□ -0.114e-7■■□□□ 13.5
PRPF8Q6P2Q9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-7■■□□□ 13.5
PRPF8Q6P2Q9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.052e-6■■□□□ 13.5
PRPF8Q6P2Q9 SIK3-206ENST00000454905 294 ntTSL 56.3□□□□□ -1.41e-7■■□□□ 13.5
PRPF8Q6P2Q9 SNORD26-201ENST00000384147 75 ntBASIC0.71□□□□□ -2.32e-19■■□□□ 13.5
PRPF8Q6P2Q9 SORBS3-215ENST00000522721 601 ntTSL 419.86■□□□□ 0.771e-6■■□□□ 13.5
PRPF8Q6P2Q9 ERF-206ENST00000596818 566 ntTSL 314.52□□□□□ -0.083e-16■■□□□ 13.5
PRPF8Q6P2Q9 GOLGA2-204ENST00000461031 475 ntTSL 311.53□□□□□ -0.565e-15■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)18.15■□□□□ 0.56e-10■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.06□□□□□ -0.646e-10■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-207ENST00000448782 975 ntTSL 1 (best)9.98□□□□□ -0.816e-10■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.656e-10■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-208ENST00000449627 909 ntTSL 42.86□□□□□ -1.956e-10■■□□□ 13.5
PRPF8Q6P2Q9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.21□□□□□ -2.066e-10■■□□□ 13.5
PRPF8Q6P2Q9 TFRC-206ENST00000463047 549 ntTSL 23.62□□□□□ -1.832e-13■■□□□ 13.5
PRPF8Q6P2Q9 TFRC-205ENST00000426789 354 ntTSL 30.92□□□□□ -2.262e-13■■□□□ 13.5
PRPF8Q6P2Q9 LMF2-203ENST00000504717 1233 ntTSL 522.53■■□□□ 1.25e-7■■□□□ 13.5
PRPF8Q6P2Q9 HGD-210ENST00000494453 683 ntTSL 32.6□□□□□ -1.998e-9■■□□□ 13.5
PRPF8Q6P2Q9 ANAPC2-207ENST00000495611 747 ntTSL 215.54■□□□□ 0.082e-6■■□□□ 13.5
PRPF8Q6P2Q9 MARS-227ENST00000552007 434 ntTSL 317.89■□□□□ 0.457e-7■■□□□ 13.5
PRPF8Q6P2Q9 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.55■□□□□ 0.47e-7■■□□□ 13.5
PRPF8Q6P2Q9 MARS-232ENST00000553162 575 ntTSL 217.18■□□□□ 0.347e-7■■□□□ 13.5
PRPF8Q6P2Q9 MARS-208ENST00000547501 510 ntTSL 216.33■□□□□ 0.27e-7■■□□□ 13.5
PRPF8Q6P2Q9 MARS-221ENST00000550449 739 ntTSL 315.2■□□□□ 0.027e-7■■□□□ 13.5
PRPF8Q6P2Q9 MARS-231ENST00000553123 724 ntTSL 26.48□□□□□ -1.377e-7■■□□□ 13.5
PRPF8Q6P2Q9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.043e-7■■□□□ 13.5
PRPF8Q6P2Q9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.173e-7■■□□□ 13.5
PRPF8Q6P2Q9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.88□□□□□ -0.353e-7■■□□□ 13.5
PRPF8Q6P2Q9 UBAC1-204ENST00000478485 773 ntTSL 220.42■□□□□ 0.867e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-215ENST00000565236 582 ntTSL 319.3■□□□□ 0.687e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-232ENST00000568443 969 ntTSL 319.3■□□□□ 0.687e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-212ENST00000491631 879 ntTSL 218.98■□□□□ 0.637e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-204ENST00000460315 723 ntTSL 318.95■□□□□ 0.627e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-210ENST00000486706 918 ntTSL 1 (best)18.65■□□□□ 0.587e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-216ENST00000579955 566 ntTSL 418.65■□□□□ 0.587e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.27■□□□□ 0.517e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-234ENST00000568472 1011 ntTSL 318.22■□□□□ 0.517e-9■■□□□ 13.5
PRPF8Q6P2Q9 JRK-208ENST00000591357 571 ntTSL 418.04■□□□□ 0.487e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.447e-9■■□□□ 13.5
PRPF8Q6P2Q9 TCEA1-205ENST00000519704 563 ntTSL 417.77■□□□□ 0.447e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-215ENST00000556892 474 ntTSL 517.66■□□□□ 0.422e-8■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.6■□□□□ 0.417e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-219ENST00000565778 688 ntTSL 1 (best)17.58■□□□□ 0.47e-9■■□□□ 13.5
PRPF8Q6P2Q9 EPS8L2-227ENST00000534449 491 ntTSL 317.39■□□□□ 0.375e-22■■□□□ 13.5
PRPF8Q6P2Q9 RFXANK-214ENST00000545522 888 ntTSL 217.27■□□□□ 0.361e-6■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-206ENST00000474716 671 ntTSL 317.14■□□□□ 0.337e-9■■□□□ 13.5
PRPF8Q6P2Q9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.12■□□□□ 0.337e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-262ENST00000637699 1228 ntTSL 217.12■□□□□ 0.337e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.07■□□□□ 0.322e-8■■□□□ 13.5
PRPF8Q6P2Q9 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.04■□□□□ 0.325e-7■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-212ENST00000564574 1159 ntTSL 217.01■□□□□ 0.317e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-209ENST00000561689 1957 ntTSL 216.95■□□□□ 0.37e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-218ENST00000585208 987 ntTSL 1 (best)16.94■□□□□ 0.37e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-203ENST00000460252 682 ntTSL 216.9■□□□□ 0.37e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-245ENST00000636172 1536 ntTSL 216.9■□□□□ 0.37e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.287e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-211ENST00000490395 1264 ntTSL 1 (best)16.77■□□□□ 0.287e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-225ENST00000566824 1326 ntTSL 516.43■□□□□ 0.227e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-206ENST00000568224 1721 ntTSL 1 (best)16.39■□□□□ 0.217e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-260ENST00000637578 1577 ntTSL 216.38■□□□□ 0.217e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.195e-7■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-218ENST00000565688 650 ntTSL 316.18■□□□□ 0.187e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-250ENST00000636839 2018 ntTSL 516.17■□□□□ 0.187e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-241ENST00000635861 1404 ntTSL 516.12■□□□□ 0.177e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.177e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-227ENST00000567495 769 ntTSL 515.9■□□□□ 0.147e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-214ENST00000565140 1225 ntTSL 215.82■□□□□ 0.127e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-221ENST00000566057 931 ntTSL 1 (best)15.82■□□□□ 0.127e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-237ENST00000569030 1109 ntTSL 215.82■□□□□ 0.127e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.82■□□□□ 0.127e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-230ENST00000568076 1968 ntTSL 515.55■□□□□ 0.087e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-258ENST00000637184 1753 ntTSL 515.44■□□□□ 0.067e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-243ENST00000635973 1084 ntTSL 515.33■□□□□ 0.057e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-217ENST00000584519 677 ntTSL 315.12■□□□□ 0.017e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-233ENST00000568452 1616 ntTSL 515.1■□□□□ 0.017e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-239ENST00000628023 1183 ntTSL 515.1■□□□□ 0.017e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.07■□□□□ 07e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.05■□□□□ 07e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-264ENST00000637985 764 ntTSL 514.9□□□□□ -0.027e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.84□□□□□ -0.037e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-231ENST00000568422 1168 ntTSL 514.62□□□□□ -0.077e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-263ENST00000637871 1606 ntTSL 514.51□□□□□ -0.097e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.39□□□□□ -0.117e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-211ENST00000636766 2061 ntTSL 514.39□□□□□ -0.117e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-208ENST00000561505 495 ntTSL 1 (best)14.37□□□□□ -0.117e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.37□□□□□ -0.117e-9■■□□□ 13.5
PRPF8Q6P2Q9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.157e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-256ENST00000637107 1946 ntTSL 514.12□□□□□ -0.157e-9■■□□□ 13.5
PRPF8Q6P2Q9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.157e-9■■□□□ 13.5
PRPF8Q6P2Q9 JRK-201ENST00000503272 587 ntTSL 414□□□□□ -0.177e-9■■□□□ 13.5
Retrieved 100 of 73,762 protein–RNA pairs in 1273.6 ms