RNA–Protein interactions for RNA: ENST00000585208.5

ZSWIM7-218, Transcript of zinc finger SWIM-type containing 7, humanhuman

TSL 1 (best)

Gene ZSWIM7, Length 987 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM7-218ENST00000585208 NISCHQ9Y2I1 1504 aa48.68■■■■■ 5.38
ZSWIM7-218ENST00000585208 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
ZSWIM7-218ENST00000585208 ABCC9O60706 1549 aa42.9■■■■■ 4.46
ZSWIM7-218ENST00000585208 RB1CC1Q8TDY2 1594 aa41.13■■■■■ 4.18
ZSWIM7-218ENST00000585208 NACADO15069 1562 aa40.99■■■■■ 4.15
ZSWIM7-218ENST00000585208 DCAF8L2P0C7V8 631 aa40.81■■■■■ 4.12
ZSWIM7-218ENST00000585208 MYO15BQ96JP2 1530 aa40.65■■■■■ 4.1
ZSWIM7-218ENST00000585208 ZCCHC6Q5VYS8 1495 aaKnown RBP40.49■■■■■ 4.07
ZSWIM7-218ENST00000585208 DCAF1Q9Y4B6 1507 aa40.31■■■■■ 4.04
ZSWIM7-218ENST00000585208 UNC13AQ9UPW8 1703 aa40.09■■■■■ 4.01
ZSWIM7-218ENST00000585208 PABPN1Q86U42 306 aaKnown RBP eCLIP40■■■■□ 3.99
ZSWIM7-218ENST00000585208 BICRAQ9NZM4 1560 aa39.84■■■■□ 3.97
ZSWIM7-218ENST00000585208 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
ZSWIM7-218ENST00000585208 SCRIBQ14160 1630 aa39.6■■■■□ 3.93
ZSWIM7-218ENST00000585208 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
ZSWIM7-218ENST00000585208 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
ZSWIM7-218ENST00000585208 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
ZSWIM7-218ENST00000585208 CECR2Q9BXF3 1484 aa38.62■■■■□ 3.77
ZSWIM7-218ENST00000585208 SMARCA4P51532 1647 aa37.86■■■■□ 3.65
ZSWIM7-218ENST00000585208 NCAPD3P42695 1498 aa37.83■■■■□ 3.65
ZSWIM7-218ENST00000585208 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
ZSWIM7-218ENST00000585208 ATAD2BQ9ULI0 1458 aa37.77■■■■□ 3.64
ZSWIM7-218ENST00000585208 SMARCA2P51531 1590 aa37.73■■■■□ 3.63
ZSWIM7-218ENST00000585208 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
ZSWIM7-218ENST00000585208 PEG3Q9GZU2 1588 aa37.52■■■■□ 3.6
ZSWIM7-218ENST00000585208 MROH2BQ7Z745 1585 aa37.48■■■■□ 3.59
ZSWIM7-218ENST00000585208 BAZ1BQ9UIG0 1483 aaKnown RBP37.45■■■■□ 3.59
ZSWIM7-218ENST00000585208 ERCC6Q03468 1493 aa37.05■■■■□ 3.52
ZSWIM7-218ENST00000585208 WIZO95785 1651 aa37.04■■■■□ 3.52
ZSWIM7-218ENST00000585208 NESP48681 1621 aa36.98■■■■□ 3.51
ZSWIM7-218ENST00000585208 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
ZSWIM7-218ENST00000585208 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
ZSWIM7-218ENST00000585208 CUX2O14529 1486 aa36.82■■■■□ 3.49
ZSWIM7-218ENST00000585208 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
ZSWIM7-218ENST00000585208 TOP2AP11388 1531 aaKnown RBP36.68■■■■□ 3.46
ZSWIM7-218ENST00000585208 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
ZSWIM7-218ENST00000585208 THOC2Q8NI27 1593 aaKnown RBP36.54■■■■□ 3.44
ZSWIM7-218ENST00000585208 KIF21AQ7Z4S6 1674 aa36.52■■■■□ 3.44
ZSWIM7-218ENST00000585208 CFTRP13569 1480 aa36.4■■■■□ 3.42
ZSWIM7-218ENST00000585208 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
ZSWIM7-218ENST00000585208 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
ZSWIM7-218ENST00000585208 FANCD2Q9BXW9 1451 aa36.26■■■■□ 3.4
ZSWIM7-218ENST00000585208 CCDC88BA6NC98 1476 aa36.23■■■■□ 3.39
ZSWIM7-218ENST00000585208 WDR62O43379 1518 aa36.2■■■■□ 3.39
ZSWIM7-218ENST00000585208 DNAJC5Q9H3Z4 198 aa36.14■■■■□ 3.38
ZSWIM7-218ENST00000585208 PRDM2Q13029 1718 aa36.04■■■■□ 3.36
ZSWIM7-218ENST00000585208 URB2Q14146 1524 aaKnown RBP35.91■■■■□ 3.34
ZSWIM7-218ENST00000585208 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
ZSWIM7-218ENST00000585208 ABCC8Q09428 1581 aa35.66■■■■□ 3.3
ZSWIM7-218ENST00000585208 TOPBP1Q92547 1522 aa35.63■■■■□ 3.29
ZSWIM7-218ENST00000585208 DNMBPQ6XZF7 1577 aa35.57■■■■□ 3.28
ZSWIM7-218ENST00000585208 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
ZSWIM7-218ENST00000585208 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
ZSWIM7-218ENST00000585208 POLA1P09884 1462 aaPredicted RBP35.31■■■■□ 3.24
ZSWIM7-218ENST00000585208 TARBP1Q13395 1621 aaKnown RBP35.26■■■■□ 3.24
ZSWIM7-218ENST00000585208 EIF4G3O43432 1585 aaKnown RBP35.22■■■■□ 3.23
ZSWIM7-218ENST00000585208 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
ZSWIM7-218ENST00000585208 CUX1P39880 1505 aa35.2■■■■□ 3.23
ZSWIM7-218ENST00000585208 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
ZSWIM7-218ENST00000585208 SOGA1O94964 1423 aa35.15■■■■□ 3.22
ZSWIM7-218ENST00000585208 RAD54L2Q9Y4B4 1467 aa35.13■■■■□ 3.21
ZSWIM7-218ENST00000585208 AQRO60306 1485 aaKnown RBP eCLIP35.12■■■■□ 3.212e-8■■■■■ 33.4
ZSWIM7-218ENST00000585208 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
ZSWIM7-218ENST00000585208 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
ZSWIM7-218ENST00000585208 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
ZSWIM7-218ENST00000585208 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
ZSWIM7-218ENST00000585208 CHD1O14646 1710 aa34.82■■■■□ 3.16
ZSWIM7-218ENST00000585208 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
ZSWIM7-218ENST00000585208 TOP2BQ02880 1626 aa34.81■■■■□ 3.16
ZSWIM7-218ENST00000585208 SNAPC4Q5SXM2 1469 aa34.8■■■■□ 3.16
ZSWIM7-218ENST00000585208 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
ZSWIM7-218ENST00000585208 FBLN2P98095 1184 aa34.79■■■■□ 3.16
ZSWIM7-218ENST00000585208 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
ZSWIM7-218ENST00000585208 GAPVD1Q14C86 1478 aa34.76■■■■□ 3.15
ZSWIM7-218ENST00000585208 SYNJ1O43426 1573 aa34.75■■■■□ 3.15
ZSWIM7-218ENST00000585208 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
ZSWIM7-218ENST00000585208 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.14
ZSWIM7-218ENST00000585208 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
ZSWIM7-218ENST00000585208 CHMP7Q8WUX9 453 aaPredicted RBP34.65■■■■□ 3.14
ZSWIM7-218ENST00000585208 RIMBP3CA6NJZ7 1639 aa34.64■■■■□ 3.14
ZSWIM7-218ENST00000585208 RIMBP3BA6NNM3 1639 aa34.64■■■■□ 3.14
ZSWIM7-218ENST00000585208 RIMBP3Q9UFD9 1639 aa34.64■■■■□ 3.14
ZSWIM7-218ENST00000585208 SYNJ2O15056 1496 aa34.64■■■■□ 3.14
ZSWIM7-218ENST00000585208 ARHGEF11O15085 1522 aa34.62■■■■□ 3.13
ZSWIM7-218ENST00000585208 CLASP1Q7Z460 1538 aa34.48■■■■□ 3.11
ZSWIM7-218ENST00000585208 ADAMTS12P58397 1594 aa34.4■■■■□ 3.1
ZSWIM7-218ENST00000585208 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
ZSWIM7-218ENST00000585208 GRIN2AQ12879 1464 aa34.36■■■■□ 3.09
ZSWIM7-218ENST00000585208 FHAD1B1AJZ9 1412 aa34.36■■■■□ 3.09
ZSWIM7-218ENST00000585208 CYB5RLQ6IPT4 315 aa34.31■■■■□ 3.08
ZSWIM7-218ENST00000585208 ARAP1Q96P48 1450 aa34.31■■■■□ 3.08
ZSWIM7-218ENST00000585208 NUP160Q12769 1436 aa34.23■■■■□ 3.07
ZSWIM7-218ENST00000585208 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
ZSWIM7-218ENST00000585208 CEP170Q5SW79 1584 aa34.17■■■■□ 3.06
ZSWIM7-218ENST00000585208 IGF1RP08069 1367 aa34.05■■■■□ 3.04
ZSWIM7-218ENST00000585208 CUL7Q14999 1698 aa34■■■■□ 3.03
ZSWIM7-218ENST00000585208 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
ZSWIM7-218ENST00000585208 ERCC6L2Q5T890 1561 aa33.93■■■■□ 3.02
ZSWIM7-218ENST00000585208 RUSC2Q8N2Y8 1516 aa33.9■■■■□ 3.02
ZSWIM7-218ENST00000585208 CARMIL1Q5VZK9 1371 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms