RNA–Protein interactions for RNA: ENST00000601858.1

ZNF563-204, Transcript of zinc finger protein 563, humanhuman

TSL 5

Gene ZNF563, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-204ENST00000601858 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
ZNF563-204ENST00000601858 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
ZNF563-204ENST00000601858 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
ZNF563-204ENST00000601858 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
ZNF563-204ENST00000601858 FOXD1Q16676 465 aa17.27■□□□□ 0.36
ZNF563-204ENST00000601858 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
ZNF563-204ENST00000601858 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
ZNF563-204ENST00000601858 MSH5O43196 834 aa16.36■□□□□ 0.21
ZNF563-204ENST00000601858 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
ZNF563-204ENST00000601858 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
ZNF563-204ENST00000601858 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
ZNF563-204ENST00000601858 ADRA2BP18089 450 aa15.87■□□□□ 0.13
ZNF563-204ENST00000601858 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
ZNF563-204ENST00000601858 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
ZNF563-204ENST00000601858 KCNA4P22459 653 aa14.56□□□□□ -0.08
ZNF563-204ENST00000601858 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
ZNF563-204ENST00000601858 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
ZNF563-204ENST00000601858 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
ZNF563-204ENST00000601858 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
ZNF563-204ENST00000601858 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
ZNF563-204ENST00000601858 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
ZNF563-204ENST00000601858 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
ZNF563-204ENST00000601858 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
ZNF563-204ENST00000601858 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
ZNF563-204ENST00000601858 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
ZNF563-204ENST00000601858 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
ZNF563-204ENST00000601858 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
ZNF563-204ENST00000601858 ABCC9O60706 1549 aa13.84□□□□□ -0.19
ZNF563-204ENST00000601858 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
ZNF563-204ENST00000601858 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
ZNF563-204ENST00000601858 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
ZNF563-204ENST00000601858 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
ZNF563-204ENST00000601858 ZBTB22O15209 634 aa13.41□□□□□ -0.26
ZNF563-204ENST00000601858 NACADO15069 1562 aa13.39□□□□□ -0.27
ZNF563-204ENST00000601858 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
ZNF563-204ENST00000601858 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
ZNF563-204ENST00000601858 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
ZNF563-204ENST00000601858 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
ZNF563-204ENST00000601858 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
ZNF563-204ENST00000601858 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
ZNF563-204ENST00000601858 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
ZNF563-204ENST00000601858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
ZNF563-204ENST00000601858 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
ZNF563-204ENST00000601858 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
ZNF563-204ENST00000601858 POTEHQ6S545 545 aa13.02□□□□□ -0.33
ZNF563-204ENST00000601858 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
ZNF563-204ENST00000601858 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
ZNF563-204ENST00000601858 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
ZNF563-204ENST00000601858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
ZNF563-204ENST00000601858 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
ZNF563-204ENST00000601858 BICRAQ9NZM4 1560 aa12.92□□□□□ -0.34
ZNF563-204ENST00000601858 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
ZNF563-204ENST00000601858 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
ZNF563-204ENST00000601858 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
ZNF563-204ENST00000601858 DSG3P32926 999 aa12.87□□□□□ -0.35
ZNF563-204ENST00000601858 CAPN15O75808 1086 aa12.82□□□□□ -0.36
ZNF563-204ENST00000601858 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
ZNF563-204ENST00000601858 APLP2Q06481 763 aa12.75□□□□□ -0.37
ZNF563-204ENST00000601858 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
ZNF563-204ENST00000601858 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
ZNF563-204ENST00000601858 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
ZNF563-204ENST00000601858 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
ZNF563-204ENST00000601858 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
ZNF563-204ENST00000601858 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.42
ZNF563-204ENST00000601858 ABCB7O75027 752 aa12.44□□□□□ -0.42
ZNF563-204ENST00000601858 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
ZNF563-204ENST00000601858 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
ZNF563-204ENST00000601858 POLA2Q14181 598 aa12.38□□□□□ -0.43
ZNF563-204ENST00000601858 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
ZNF563-204ENST00000601858 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
ZNF563-204ENST00000601858 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
ZNF563-204ENST00000601858 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
ZNF563-204ENST00000601858 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
ZNF563-204ENST00000601858 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
ZNF563-204ENST00000601858 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
ZNF563-204ENST00000601858 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
ZNF563-204ENST00000601858 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
ZNF563-204ENST00000601858 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
ZNF563-204ENST00000601858 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
ZNF563-204ENST00000601858 FBLN2P98095 1184 aa12.19□□□□□ -0.46
ZNF563-204ENST00000601858 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
ZNF563-204ENST00000601858 WIZO95785 1651 aa12.16□□□□□ -0.46
ZNF563-204ENST00000601858 FKBP8Q14318 412 aa12.12□□□□□ -0.47
ZNF563-204ENST00000601858 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
ZNF563-204ENST00000601858 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
ZNF563-204ENST00000601858 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
ZNF563-204ENST00000601858 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
ZNF563-204ENST00000601858 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
ZNF563-204ENST00000601858 NESP48681 1621 aa11.97□□□□□ -0.49
ZNF563-204ENST00000601858 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
ZNF563-204ENST00000601858 PDS5BQ9NTI5 1447 aa11.95□□□□□ -0.5
ZNF563-204ENST00000601858 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
ZNF563-204ENST00000601858 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
ZNF563-204ENST00000601858 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
ZNF563-204ENST00000601858 CFTRP13569 1480 aa11.94□□□□□ -0.5
ZNF563-204ENST00000601858 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
ZNF563-204ENST00000601858 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
ZNF563-204ENST00000601858 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
ZNF563-204ENST00000601858 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
ZNF563-204ENST00000601858 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms