RNA–Protein interactions for RNA: ENST00000503272.1

JRK-201, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 4

Gene JRK, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-201ENST00000503272 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
JRK-201ENST00000503272 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
JRK-201ENST00000503272 ABCC9O60706 1549 aa35.82■■■■□ 3.32
JRK-201ENST00000503272 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
JRK-201ENST00000503272 NACADO15069 1562 aa34.16■■■■□ 3.06
JRK-201ENST00000503272 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
JRK-201ENST00000503272 MYO15BQ96JP2 1530 aa33.82■■■■□ 3
JRK-201ENST00000503272 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
JRK-201ENST00000503272 UNC13AQ9UPW8 1703 aa33.53■■■□□ 2.96
JRK-201ENST00000503272 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
JRK-201ENST00000503272 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
JRK-201ENST00000503272 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.91
JRK-201ENST00000503272 DNAJC5BQ9UF47 199 aa33.09■■■□□ 2.89
JRK-201ENST00000503272 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
JRK-201ENST00000503272 SHROOM4Q9ULL8 1493 aa32.96■■■□□ 2.87
JRK-201ENST00000503272 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
JRK-201ENST00000503272 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
JRK-201ENST00000503272 CECR2Q9BXF3 1484 aa32.24■■■□□ 2.75
JRK-201ENST00000503272 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
JRK-201ENST00000503272 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
JRK-201ENST00000503272 NCAPD3P42695 1498 aa31.47■■■□□ 2.63
JRK-201ENST00000503272 SMARCA2P51531 1590 aa31.45■■■□□ 2.63
JRK-201ENST00000503272 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.62
JRK-201ENST00000503272 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
JRK-201ENST00000503272 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
JRK-201ENST00000503272 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
JRK-201ENST00000503272 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
JRK-201ENST00000503272 ERCC6Q03468 1493 aa30.95■■■□□ 2.55
JRK-201ENST00000503272 WIZO95785 1651 aa30.87■■■□□ 2.53
JRK-201ENST00000503272 NESP48681 1621 aa30.86■■■□□ 2.53
JRK-201ENST00000503272 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
JRK-201ENST00000503272 CUX2O14529 1486 aa30.77■■■□□ 2.52
JRK-201ENST00000503272 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
JRK-201ENST00000503272 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
JRK-201ENST00000503272 TOP2AP11388 1531 aaKnown RBP30.56■■■□□ 2.48
JRK-201ENST00000503272 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
JRK-201ENST00000503272 PDS5BQ9NTI5 1447 aa30.55■■■□□ 2.48
JRK-201ENST00000503272 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
JRK-201ENST00000503272 MRC2Q9UBG0 1479 aa30.3■■■□□ 2.44
JRK-201ENST00000503272 CFTRP13569 1480 aa30.29■■■□□ 2.44
JRK-201ENST00000503272 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.44
JRK-201ENST00000503272 WDR62O43379 1518 aa30.23■■■□□ 2.43
JRK-201ENST00000503272 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
JRK-201ENST00000503272 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
JRK-201ENST00000503272 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
JRK-201ENST00000503272 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
JRK-201ENST00000503272 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
JRK-201ENST00000503272 TOPBP1Q92547 1522 aa29.7■■■□□ 2.34
JRK-201ENST00000503272 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
JRK-201ENST00000503272 ABCC8Q09428 1581 aa29.66■■■□□ 2.34
JRK-201ENST00000503272 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
JRK-201ENST00000503272 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
JRK-201ENST00000503272 ZNF608Q9ULD9 1512 aaPredicted RBP29.49■■■□□ 2.31
JRK-201ENST00000503272 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
JRK-201ENST00000503272 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
JRK-201ENST00000503272 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
JRK-201ENST00000503272 CUX1P39880 1505 aa29.32■■■□□ 2.28
JRK-201ENST00000503272 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
JRK-201ENST00000503272 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
JRK-201ENST00000503272 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
JRK-201ENST00000503272 AQRO60306 1485 aaKnown RBP eCLIP29.24■■■□□ 2.278e-6■■■■□ 23.2
JRK-201ENST00000503272 SOGA1O94964 1423 aa29.23■■■□□ 2.27
JRK-201ENST00000503272 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
JRK-201ENST00000503272 CHD1O14646 1710 aa29.14■■■□□ 2.25
JRK-201ENST00000503272 TDRD9Q8NDG6 1382 aaKnown RBP29.12■■■□□ 2.25
JRK-201ENST00000503272 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
JRK-201ENST00000503272 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
JRK-201ENST00000503272 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
JRK-201ENST00000503272 GRIN2BQ13224 1484 aa29■■■□□ 2.23
JRK-201ENST00000503272 RIMBP3CA6NJZ7 1639 aa28.99■■■□□ 2.23
JRK-201ENST00000503272 RIMBP3BA6NNM3 1639 aa28.99■■■□□ 2.23
JRK-201ENST00000503272 RIMBP3Q9UFD9 1639 aa28.99■■■□□ 2.23
JRK-201ENST00000503272 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
JRK-201ENST00000503272 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
JRK-201ENST00000503272 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
JRK-201ENST00000503272 WRNQ14191 1432 aaPredicted RBP eCLIP28.98■■■□□ 2.23
JRK-201ENST00000503272 ABCA10Q8WWZ4 1543 aa28.98■■■□□ 2.23
JRK-201ENST00000503272 FBLN2P98095 1184 aa28.96■■■□□ 2.23
JRK-201ENST00000503272 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
JRK-201ENST00000503272 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
JRK-201ENST00000503272 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
JRK-201ENST00000503272 GAPVD1Q14C86 1478 aa28.93■■■□□ 2.22
JRK-201ENST00000503272 SYNJ2O15056 1496 aa28.88■■■□□ 2.21
JRK-201ENST00000503272 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
JRK-201ENST00000503272 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
JRK-201ENST00000503272 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
JRK-201ENST00000503272 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
JRK-201ENST00000503272 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
JRK-201ENST00000503272 GRIN2AQ12879 1464 aa28.65■■■□□ 2.18
JRK-201ENST00000503272 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
JRK-201ENST00000503272 CYB5RLQ6IPT4 315 aa28.57■■■□□ 2.16
JRK-201ENST00000503272 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
JRK-201ENST00000503272 NUP160Q12769 1436 aa28.51■■■□□ 2.15
JRK-201ENST00000503272 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
JRK-201ENST00000503272 SHROOM2Q13796 1616 aa28.38■■■□□ 2.13
JRK-201ENST00000503272 CUL7Q14999 1698 aa28.36■■■□□ 2.13
JRK-201ENST00000503272 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
JRK-201ENST00000503272 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.12
JRK-201ENST00000503272 IGF1RP08069 1367 aa28.24■■■□□ 2.11
JRK-201ENST00000503272 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms