Protein–RNA interactions for Protein: Q9H6R3

ACSS3, Acyl-CoA synthetase short-chain family member 3, mitochondrial, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3Q9H6R3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 SUDS3P1-201ENST00000505831 966 ntBASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
ACSS3Q9H6R3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 AC116562.4-201ENST00000641316 2276 ntBASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACSS3Q9H6R3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 AL158211.5-201ENST00000623583 2518 ntBASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 IRS3P-201ENST00000223076 1006 ntBASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACSS3Q9H6R3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.45■□□□□ 0.86
ACSS3Q9H6R3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 KRT8P36-201ENST00000489121 1440 ntBASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.44■□□□□ 0.86
ACSS3Q9H6R3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4L2-201ENST00000561772 1275 ntBASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4L6-201ENST00000626483 1275 ntBASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4L1-201ENST00000627662 1275 ntBASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4L8-201ENST00000629013 1275 ntBASIC20.43■□□□□ 0.86
ACSS3Q9H6R3 DUX4L3-201ENST00000630187 1275 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms