RNA–Protein interactions for RNA: ENST00000403859.1

GPR35-202, Transcript of G protein-coupled receptor 35, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GPR35, Length 2,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPR35-202ENST00000403859 NISCHQ9Y2I1 1504 aa45.3■■■■■ 4.84
GPR35-202ENST00000403859 CCDC180Q9P1Z9 1646 aa39.48■■■■□ 3.91
GPR35-202ENST00000403859 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
GPR35-202ENST00000403859 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
GPR35-202ENST00000403859 DCAF8L2P0C7V8 631 aa37.45■■■■□ 3.59
GPR35-202ENST00000403859 ABCC9O60706 1549 aa37.36■■■■□ 3.57
GPR35-202ENST00000403859 MYO15BQ96JP2 1530 aa37.06■■■■□ 3.52
GPR35-202ENST00000403859 SHROOM4Q9ULL8 1493 aa36.92■■■■□ 3.5
GPR35-202ENST00000403859 NACADO15069 1562 aa36.82■■■■□ 3.48
GPR35-202ENST00000403859 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
GPR35-202ENST00000403859 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
GPR35-202ENST00000403859 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
GPR35-202ENST00000403859 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
GPR35-202ENST00000403859 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
GPR35-202ENST00000403859 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.239e-7■■■□□ 16.2
GPR35-202ENST00000403859 CECR2Q9BXF3 1484 aa35.18■■■■□ 3.22
GPR35-202ENST00000403859 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
GPR35-202ENST00000403859 BAZ1AQ9NRL2 1556 aaPredicted RBP34.99■■■■□ 3.19
GPR35-202ENST00000403859 MROH2BQ7Z745 1585 aa34.98■■■■□ 3.19
GPR35-202ENST00000403859 SMARCA4P51532 1647 aa34.8■■■■□ 3.16
GPR35-202ENST00000403859 WIZO95785 1651 aa34.66■■■■□ 3.14
GPR35-202ENST00000403859 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
GPR35-202ENST00000403859 TOP2AP11388 1531 aaKnown RBP34.34■■■■□ 3.09
GPR35-202ENST00000403859 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
GPR35-202ENST00000403859 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
GPR35-202ENST00000403859 SMARCA2P51531 1590 aa34.26■■■■□ 3.07
GPR35-202ENST00000403859 BAZ1BQ9UIG0 1483 aaKnown RBP34.08■■■■□ 3.05
GPR35-202ENST00000403859 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
GPR35-202ENST00000403859 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
GPR35-202ENST00000403859 NCAPD3P42695 1498 aa34■■■■□ 3.03
GPR35-202ENST00000403859 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
GPR35-202ENST00000403859 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
GPR35-202ENST00000403859 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
GPR35-202ENST00000403859 ABCC8Q09428 1581 aa33.24■■■□□ 2.91
GPR35-202ENST00000403859 CFTRP13569 1480 aa33.23■■■□□ 2.91
GPR35-202ENST00000403859 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
GPR35-202ENST00000403859 WRNQ14191 1432 aaPredicted RBP eCLIP33.1■■■□□ 2.89
GPR35-202ENST00000403859 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
GPR35-202ENST00000403859 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
GPR35-202ENST00000403859 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
GPR35-202ENST00000403859 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
GPR35-202ENST00000403859 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
GPR35-202ENST00000403859 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
GPR35-202ENST00000403859 NESP48681 1621 aa32.78■■■□□ 2.84
GPR35-202ENST00000403859 BIVM-ERCC5R4GMW8 1640 aa32.74■■■□□ 2.83
GPR35-202ENST00000403859 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
GPR35-202ENST00000403859 CUX1P39880 1505 aa32.71■■■□□ 2.83
GPR35-202ENST00000403859 LOC105371045A0A1W2PR82 267 aa32.7■■■□□ 2.83
GPR35-202ENST00000403859 SOGA1O94964 1423 aa32.65■■■□□ 2.82
GPR35-202ENST00000403859 EEA1Q15075 1411 aa32.64■■■□□ 2.81
GPR35-202ENST00000403859 PDS5BQ9NTI5 1447 aa32.61■■■□□ 2.81
GPR35-202ENST00000403859 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
GPR35-202ENST00000403859 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
GPR35-202ENST00000403859 CSRNP3Q8WYN3 585 aa32.46■■■□□ 2.79
GPR35-202ENST00000403859 DNMBPQ6XZF7 1577 aa32.43■■■□□ 2.78
GPR35-202ENST00000403859 TOPBP1Q92547 1522 aa32.38■■■□□ 2.77
GPR35-202ENST00000403859 FGD5Q6ZNL6 1462 aa32.37■■■□□ 2.77
GPR35-202ENST00000403859 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
GPR35-202ENST00000403859 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
GPR35-202ENST00000403859 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
GPR35-202ENST00000403859 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
GPR35-202ENST00000403859 POLA1P09884 1462 aaPredicted RBP32.22■■■□□ 2.75
GPR35-202ENST00000403859 CUX2O14529 1486 aa32.17■■■□□ 2.74
GPR35-202ENST00000403859 KIF21BO75037 1637 aa32.16■■■□□ 2.74
GPR35-202ENST00000403859 GOLGA3Q08378 1498 aa32.15■■■□□ 2.74
GPR35-202ENST00000403859 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
GPR35-202ENST00000403859 ABCA10Q8WWZ4 1543 aa32.1■■■□□ 2.73
GPR35-202ENST00000403859 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
GPR35-202ENST00000403859 TNIKQ9UKE5 1360 aa32.07■■■□□ 2.72
GPR35-202ENST00000403859 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
GPR35-202ENST00000403859 UBTFP17480 764 aaKnown RBP32.04■■■□□ 2.72
GPR35-202ENST00000403859 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
GPR35-202ENST00000403859 IGF1RP08069 1367 aa31.99■■■□□ 2.71
GPR35-202ENST00000403859 RAPGEF2Q9Y4G8 1499 aa31.99■■■□□ 2.71
GPR35-202ENST00000403859 WDR62O43379 1518 aa31.97■■■□□ 2.71
GPR35-202ENST00000403859 ERICH3Q5RHP9 1530 aa31.97■■■□□ 2.71
GPR35-202ENST00000403859 WDR97A6NE52 1622 aa31.92■■■□□ 2.7
GPR35-202ENST00000403859 CEP162Q5TB80 1403 aa31.87■■■□□ 2.69
GPR35-202ENST00000403859 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
GPR35-202ENST00000403859 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
GPR35-202ENST00000403859 CARMIL1Q5VZK9 1371 aa31.83■■■□□ 2.69
GPR35-202ENST00000403859 TDRD9Q8NDG6 1382 aaKnown RBP31.82■■■□□ 2.68
GPR35-202ENST00000403859 ABCA5Q8WWZ7 1642 aa31.8■■■□□ 2.68
GPR35-202ENST00000403859 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
GPR35-202ENST00000403859 IFT140Q96RY7 1462 aa31.77■■■□□ 2.68
GPR35-202ENST00000403859 PCGF6Q9BYE7 350 aa31.76■■■□□ 2.67
GPR35-202ENST00000403859 CUL7Q14999 1698 aa31.7■■■□□ 2.67
GPR35-202ENST00000403859 CLIP1P30622 1438 aa31.64■■■□□ 2.66
GPR35-202ENST00000403859 HRCP23327 699 aa31.63■■■□□ 2.65
GPR35-202ENST00000403859 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.653e-6■■■■□ 20.3
GPR35-202ENST00000403859 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
GPR35-202ENST00000403859 GRIN2BQ13224 1484 aa31.54■■■□□ 2.64
GPR35-202ENST00000403859 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
GPR35-202ENST00000403859 RANGAP1P46060 587 aaPredicted RBP31.48■■■□□ 2.63
GPR35-202ENST00000403859 FHAD1B1AJZ9 1412 aa31.45■■■□□ 2.62
GPR35-202ENST00000403859 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
GPR35-202ENST00000403859 ADAMTS12P58397 1594 aa31.39■■■□□ 2.62
GPR35-202ENST00000403859 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
GPR35-202ENST00000403859 VPS8Q8N3P4 1428 aa31.36■■■□□ 2.61
GPR35-202ENST00000403859 ARHGAP35Q9NRY4 1499 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms