RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
COL13A1-205ENST00000398978 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
COL13A1-205ENST00000398978 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
COL13A1-205ENST00000398978 DCAF8L2P0C7V8 631 aa33.65■■■□□ 2.98
COL13A1-205ENST00000398978 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
COL13A1-205ENST00000398978 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
COL13A1-205ENST00000398978 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
COL13A1-205ENST00000398978 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
COL13A1-205ENST00000398978 PCGF6Q9BYE7 350 aa32.36■■■□□ 2.77
COL13A1-205ENST00000398978 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
COL13A1-205ENST00000398978 LOC105371045A0A1W2PR82 267 aa32.27■■■□□ 2.76
COL13A1-205ENST00000398978 HRCP23327 699 aa32.22■■■□□ 2.75
COL13A1-205ENST00000398978 PPARGC1BQ86YN6 1023 aaKnown RBP31.93■■■□□ 2.7
COL13A1-205ENST00000398978 SCRIBQ14160 1630 aa31.85■■■□□ 2.69
COL13A1-205ENST00000398978 ABCC9O60706 1549 aa31.73■■■□□ 2.67
COL13A1-205ENST00000398978 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
COL13A1-205ENST00000398978 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
COL13A1-205ENST00000398978 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
COL13A1-205ENST00000398978 TRIM41Q8WV44 630 aa31.51■■■□□ 2.64
COL13A1-205ENST00000398978 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
COL13A1-205ENST00000398978 TRIM26Q12899 539 aaPredicted RBP31.39■■■□□ 2.62
COL13A1-205ENST00000398978 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
COL13A1-205ENST00000398978 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
COL13A1-205ENST00000398978 NACADO15069 1562 aa30.95■■■□□ 2.55
COL13A1-205ENST00000398978 WIZO95785 1651 aa30.94■■■□□ 2.54
COL13A1-205ENST00000398978 ZEB1P37275 1124 aaPredicted RBP30.59■■■□□ 2.49
COL13A1-205ENST00000398978 TTBK1Q5TCY1 1321 aaPredicted RBP30.56■■■□□ 2.48
COL13A1-205ENST00000398978 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.47
COL13A1-205ENST00000398978 ABCC8Q09428 1581 aa30.44■■■□□ 2.46
COL13A1-205ENST00000398978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.42■■■□□ 2.46
COL13A1-205ENST00000398978 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
COL13A1-205ENST00000398978 CCDC88BA6NC98 1476 aa30.33■■■□□ 2.45
COL13A1-205ENST00000398978 PABPN1Q86U42 306 aaKnown RBP eCLIP30.3■■■□□ 2.44
COL13A1-205ENST00000398978 CCER1Q8TC90 406 aaPredicted RBP30.23■■■□□ 2.43
COL13A1-205ENST00000398978 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
COL13A1-205ENST00000398978 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
COL13A1-205ENST00000398978 SOGA1O94964 1423 aa30.2■■■□□ 2.42
COL13A1-205ENST00000398978 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
COL13A1-205ENST00000398978 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
COL13A1-205ENST00000398978 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
COL13A1-205ENST00000398978 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
COL13A1-205ENST00000398978 CEP162Q5TB80 1403 aa30.04■■■□□ 2.4
COL13A1-205ENST00000398978 CSRNP3Q8WYN3 585 aa29.97■■■□□ 2.39
COL13A1-205ENST00000398978 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
COL13A1-205ENST00000398978 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
COL13A1-205ENST00000398978 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.36
COL13A1-205ENST00000398978 RANGAP1P46060 587 aaPredicted RBP29.8■■■□□ 2.36
COL13A1-205ENST00000398978 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.36
COL13A1-205ENST00000398978 DIEXFQ68CQ4 756 aaKnown RBP29.68■■■□□ 2.34
COL13A1-205ENST00000398978 GOLGA3Q08378 1498 aa29.64■■■□□ 2.34
COL13A1-205ENST00000398978 EEA1Q15075 1411 aa29.63■■■□□ 2.33
COL13A1-205ENST00000398978 HNRNPUL2Q1KMD3 747 aaKnown RBP29.63■■■□□ 2.33
COL13A1-205ENST00000398978 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
COL13A1-205ENST00000398978 NEUROD1Q13562 356 aa29.59■■■□□ 2.33
COL13A1-205ENST00000398978 ACIN1Q9UKV3 1341 aaKnown RBP29.49■■■□□ 2.31
COL13A1-205ENST00000398978 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
COL13A1-205ENST00000398978 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
COL13A1-205ENST00000398978 CLIP1P30622 1438 aa29.43■■■□□ 2.3
COL13A1-205ENST00000398978 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
COL13A1-205ENST00000398978 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
COL13A1-205ENST00000398978 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
COL13A1-205ENST00000398978 APLP2Q06481 763 aa29.33■■■□□ 2.29
COL13A1-205ENST00000398978 ZNF316A6NFI3 1004 aaPredicted RBP29.32■■■□□ 2.28
COL13A1-205ENST00000398978 GTF3C3Q9Y5Q9 886 aa29.31■■■□□ 2.28
COL13A1-205ENST00000398978 YTHDC1Q96MU7 727 aaKnown RBP29.29■■■□□ 2.28
COL13A1-205ENST00000398978 KIF21BO75037 1637 aa29.27■■■□□ 2.28
COL13A1-205ENST00000398978 VPS8Q8N3P4 1428 aa29.23■■■□□ 2.27
COL13A1-205ENST00000398978 CENPBP07199 599 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-205ENST00000398978 MIER1Q8N108 512 aa29.09■■■□□ 2.25
COL13A1-205ENST00000398978 PELP1Q8IZL8 1130 aaKnown RBP29.06■■■□□ 2.24
COL13A1-205ENST00000398978 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
COL13A1-205ENST00000398978 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
COL13A1-205ENST00000398978 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
COL13A1-205ENST00000398978 ITGAEP38570 1179 aa28.88■■■□□ 2.21
COL13A1-205ENST00000398978 CUX1P39880 1505 aa28.87■■■□□ 2.21
COL13A1-205ENST00000398978 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
COL13A1-205ENST00000398978 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
COL13A1-205ENST00000398978 DHX57Q6P158 1386 aaKnown RBP28.76■■■□□ 2.19
COL13A1-205ENST00000398978 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
COL13A1-205ENST00000398978 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
COL13A1-205ENST00000398978 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
COL13A1-205ENST00000398978 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
COL13A1-205ENST00000398978 ARHGAP35Q9NRY4 1499 aa28.62■■■□□ 2.17
COL13A1-205ENST00000398978 CFTRP13569 1480 aa28.62■■■□□ 2.17
COL13A1-205ENST00000398978 P3H3Q8IVL6 736 aa28.57■■■□□ 2.16
COL13A1-205ENST00000398978 CUX2O14529 1486 aa28.57■■■□□ 2.16
COL13A1-205ENST00000398978 ATP1B4Q9UN42 357 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-205ENST00000398978 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
COL13A1-205ENST00000398978 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
COL13A1-205ENST00000398978 IGF1RP08069 1367 aa28.5■■■□□ 2.15
COL13A1-205ENST00000398978 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
COL13A1-205ENST00000398978 CARMIL1Q5VZK9 1371 aa28.4■■■□□ 2.14
COL13A1-205ENST00000398978 FAM50AQ14320 339 aaKnown RBP28.4■■■□□ 2.14
COL13A1-205ENST00000398978 RAB3GAP2Q9H2M9 1393 aa28.38■■■□□ 2.13
COL13A1-205ENST00000398978 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
COL13A1-205ENST00000398978 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
COL13A1-205ENST00000398978 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
COL13A1-205ENST00000398978 KCNH8Q96L42 1107 aa28.3■■■□□ 2.12
COL13A1-205ENST00000398978 PHLDB1Q86UU1 1377 aa28.29■■■□□ 2.12
COL13A1-205ENST00000398978 TIAM1Q13009 1591 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms