Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 AC211429.1-201ENST00000415277 523 ntBASIC21.87■■□□□ 1.09
CASD1Q96PB1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 AL049637.2-201ENST00000641778 930 ntBASIC21.87■■□□□ 1.09
CASD1Q96PB1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.87■■□□□ 1.09
CASD1Q96PB1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CASD1Q96PB1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 AC027702.1-201ENST00000563810 1770 ntBASIC21.86■■□□□ 1.09
CASD1Q96PB1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.86■■□□□ 1.09
CASD1Q96PB1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CASD1Q96PB1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.85■■□□□ 1.09
CASD1Q96PB1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASD1Q96PB1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.84■■□□□ 1.09
CASD1Q96PB1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.84■■□□□ 1.09
CASD1Q96PB1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASD1Q96PB1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CASD1Q96PB1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASD1Q96PB1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASD1Q96PB1 BX088651.1-201ENST00000540551 451 ntBASIC21.83■■□□□ 1.09
CASD1Q96PB1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.83■■□□□ 1.09
CASD1Q96PB1 AC113410.3-201ENST00000623366 203 ntBASIC21.83■■□□□ 1.09
CASD1Q96PB1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.83■■□□□ 1.08
CASD1Q96PB1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CASD1Q96PB1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CASD1Q96PB1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 KRT17P2-201ENST00000300992 1314 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.82■■□□□ 1.08
CASD1Q96PB1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 KRT8P36-201ENST00000489121 1440 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 AL135905.2-201ENST00000584934 1404 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CASD1Q96PB1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.82■■□□□ 1.08
CASD1Q96PB1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.82■■□□□ 1.08
CASD1Q96PB1 RARRES2P10-201ENST00000564312 460 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms