Protein–RNA interactions for Protein: Q6KC79

NIPBL, Nipped-B-like protein, humanhuman

eCLIP

Length 2,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBLQ6KC79 SMARCA4-216ENST00000591545 5193 ntTSL 27.6□□□□□ -1.192e-8■□□□□ 11.1
NIPBLQ6KC79 CIT-208ENST00000537607 4958 ntTSL 57.56□□□□□ -1.21e-5■□□□□ 11.1
NIPBLQ6KC79 CAST-230ENST00000510156 2079 ntAPPRIS ALT2 TSL 57.56□□□□□ -1.21e-7■□□□□ 11.1
NIPBLQ6KC79 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.211e-7■□□□□ 11.1
NIPBLQ6KC79 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.52□□□□□ -1.211e-7■□□□□ 11.1
NIPBLQ6KC79 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.211e-5■□□□□ 11.1
NIPBLQ6KC79 FASN-213ENST00000637693 100 ntTSL 57.46□□□□□ -1.221e-5■□□□□ 11.1
NIPBLQ6KC79 CHD9-219ENST00000569225 1862 ntTSL 27.44□□□□□ -1.221e-5■□□□□ 11.1
NIPBLQ6KC79 GLUL-209ENST00000480604 908 ntTSL 57.42□□□□□ -1.221e-5■□□□□ 11.1
NIPBLQ6KC79 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.231e-7■□□□□ 11.1
NIPBLQ6KC79 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.231e-5■□□□□ 11.1
NIPBLQ6KC79 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.241e-6■□□□□ 11.1
NIPBLQ6KC79 ZNF841-207ENST00000601738 2027 ntTSL 57.24□□□□□ -1.251e-6■□□□□ 11.1
NIPBLQ6KC79 WDTC1-205ENST00000491239 5149 ntTSL 27.23□□□□□ -1.251e-5■□□□□ 11.1
NIPBLQ6KC79 SEM1-223ENST00000623498 582 ntTSL 5 BASIC7.12□□□□□ -1.271e-5■□□□□ 11.1
NIPBLQ6KC79 SEM1-210ENST00000488005 775 ntTSL 2 BASIC7.12□□□□□ -1.271e-5■□□□□ 11.1
NIPBLQ6KC79 AGAP3-212ENST00000473633 3751 ntTSL 1 (best)6.99□□□□□ -1.291e-6■□□□□ 11.1
NIPBLQ6KC79 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.31e-6■□□□□ 11.1
NIPBLQ6KC79 BIRC6-202ENST00000431454 508 ntTSL 36.94□□□□□ -1.31e-6■□□□□ 11.1
NIPBLQ6KC79 CIT-217ENST00000545913 8520 ntTSL 56.78□□□□□ -1.321e-5■□□□□ 11.1
NIPBLQ6KC79 SEM1-204ENST00000417009 350 ntTSL 3 BASIC6.72□□□□□ -1.331e-5■□□□□ 11.1
NIPBLQ6KC79 RPS20-206ENST00000520490 402 ntTSL 36.68□□□□□ -1.341e-7■□□□□ 11.1
NIPBLQ6KC79 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.58□□□□□ -1.361e-7■□□□□ 11.1
NIPBLQ6KC79 SEM1-224ENST00000623693 729 ntTSL 5 BASIC6.37□□□□□ -1.391e-5■□□□□ 11.1
NIPBLQ6KC79 PRDX6-203ENST00000470017 859 ntTSL 26.3□□□□□ -1.41e-7■□□□□ 11.1
NIPBLQ6KC79 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.41e-5■□□□□ 11.1
NIPBLQ6KC79 SEM1-219ENST00000618105 544 ntTSL 26.27□□□□□ -1.411e-5■□□□□ 11.1
NIPBLQ6KC79 RARS-204ENST00000520013 1990 ntTSL 26.25□□□□□ -1.411e-5■□□□□ 11.1
NIPBLQ6KC79 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.2□□□□□ -1.421e-7■□□□□ 11.1
NIPBLQ6KC79 SEM1-207ENST00000466986 507 ntTSL 26.17□□□□□ -1.421e-5■□□□□ 11.1
NIPBLQ6KC79 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.431e-7■□□□□ 11.1
NIPBLQ6KC79 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.461e-5■□□□□ 11.1
NIPBLQ6KC79 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.461e-5■□□□□ 11.1
NIPBLQ6KC79 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.461e-5■□□□□ 11.1
NIPBLQ6KC79 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC5.89□□□□□ -1.471e-7■□□□□ 11.1
NIPBLQ6KC79 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.471e-5■□□□□ 11.1
NIPBLQ6KC79 SLTM-208ENST00000492526 3022 ntTSL 25.8□□□□□ -1.481e-5■□□□□ 11.1
NIPBLQ6KC79 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.51e-6■□□□□ 11.1
NIPBLQ6KC79 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC5.55□□□□□ -1.521e-5■□□□□ 11.1
NIPBLQ6KC79 RPL5-205ENST00000497519 1210 ntTSL 25.47□□□□□ -1.536e-17■□□□□ 11.1
NIPBLQ6KC79 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.561e-7■□□□□ 11.1
NIPBLQ6KC79 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC5.29□□□□□ -1.561e-6■□□□□ 11.1
NIPBLQ6KC79 SNORA16A-202ENST00000628458 135 ntBASIC5.26□□□□□ -1.571e-19■□□□□ 11.1
NIPBLQ6KC79 SLTM-219ENST00000559305 559 ntTSL 45.24□□□□□ -1.571e-5■□□□□ 11.1
NIPBLQ6KC79 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.591e-5■□□□□ 11.1
NIPBLQ6KC79 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.61e-6■□□□□ 11.1
NIPBLQ6KC79 PPP1R10-206ENST00000484449 605 ntTSL 54.92□□□□□ -1.622e-8■□□□□ 11.1
NIPBLQ6KC79 GLUL-212ENST00000491322 6132 ntTSL 1 (best)4.9□□□□□ -1.621e-5■□□□□ 11.1
NIPBLQ6KC79 SLTM-201ENST00000249736 1373 ntAPPRIS ALT2 TSL 54.9□□□□□ -1.631e-5■□□□□ 11.1
NIPBLQ6KC79 SCML2-204ENST00000491988 807 ntTSL 24.89□□□□□ -1.631e-5■□□□□ 11.1
NIPBLQ6KC79 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC4.79□□□□□ -1.641e-5■□□□□ 11.1
NIPBLQ6KC79 SNORA16A-201ENST00000384342 137 ntBASIC4.61□□□□□ -1.671e-19■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-211ENST00000531616 3108 ntTSL 34.48□□□□□ -1.691e-5■□□□□ 11.1
NIPBLQ6KC79 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC4.3□□□□□ -1.721e-5■□□□□ 11.1
NIPBLQ6KC79 THOC2-205ENST00000432353 3188 ntTSL 1 (best)4.25□□□□□ -1.736e-7■□□□□ 11.1
NIPBLQ6KC79 RARS-202ENST00000518757 580 ntTSL 54.24□□□□□ -1.731e-5■□□□□ 11.1
NIPBLQ6KC79 NUB1-205ENST00000470316 1752 ntTSL 54.21□□□□□ -1.731e-5■□□□□ 11.1
NIPBLQ6KC79 SCML2-203ENST00000420857 2435 ntTSL 24.16□□□□□ -1.741e-5■□□□□ 11.1
NIPBLQ6KC79 ANKHD1-216ENST00000490185 829 ntTSL 24.09□□□□□ -1.751e-5■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC4□□□□□ -1.771e-5■□□□□ 11.1
NIPBLQ6KC79 SNORA66-201ENST00000384792 133 ntBASIC3.95□□□□□ -1.786e-17■□□□□ 11.1
NIPBLQ6KC79 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC3.92□□□□□ -1.781e-5■□□□□ 11.1
NIPBLQ6KC79 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.77□□□□□ -1.811e-5■□□□□ 11.1
NIPBLQ6KC79 SLTM-217ENST00000558756 896 ntTSL 53.67□□□□□ -1.821e-5■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-208ENST00000529970 3786 ntTSL 23.67□□□□□ -1.821e-5■□□□□ 11.1
NIPBLQ6KC79 CEP350-209ENST00000490141 3549 ntTSL 23.65□□□□□ -1.821e-5■□□□□ 11.1
NIPBLQ6KC79 CIT-207ENST00000536325 329 ntTSL 33.63□□□□□ -1.831e-5■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC3.54□□□□□ -1.841e-5■□□□□ 11.1
NIPBLQ6KC79 PPP1R10-204ENST00000473954 470 ntTSL 33.49□□□□□ -1.852e-8■□□□□ 11.1
NIPBLQ6KC79 SEM1-217ENST00000617133 591 ntTSL 23.44□□□□□ -1.861e-5■□□□□ 11.1
NIPBLQ6KC79 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC3.39□□□□□ -1.871e-5■□□□□ 11.1
NIPBLQ6KC79 THOC2-208ENST00000441692 4364 ntTSL 53.36□□□□□ -1.876e-7■□□□□ 11.1
NIPBLQ6KC79 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.881e-6■□□□□ 11.1
NIPBLQ6KC79 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.891e-5■□□□□ 11.1
NIPBLQ6KC79 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.891e-5■□□□□ 11.1
NIPBLQ6KC79 THOC2-203ENST00000416618 657 ntTSL 53.16□□□□□ -1.96e-7■□□□□ 11.1
NIPBLQ6KC79 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.911e-5■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.911e-5■□□□□ 11.1
NIPBLQ6KC79 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.921e-5■□□□□ 11.1
NIPBLQ6KC79 THOC2-215ENST00000464992 902 ntTSL 53.05□□□□□ -1.922e-8■□□□□ 11.1
NIPBLQ6KC79 CAST-215ENST00000505143 864 ntTSL 33.02□□□□□ -1.931e-7■□□□□ 11.1
NIPBLQ6KC79 CHD9-201ENST00000219084 8739 ntTSL 1 (best)2.96□□□□□ -1.941e-5■□□□□ 11.1
NIPBLQ6KC79 SEM1-220ENST00000619259 462 ntTSL 22.96□□□□□ -1.941e-5■□□□□ 11.1
NIPBLQ6KC79 RNF217-207ENST00000519565 10660 ntTSL 52.85□□□□□ -1.951e-7■□□□□ 11.1
NIPBLQ6KC79 TRPM7-205ENST00000560638 2518 ntTSL 1 (best)2.76□□□□□ -1.971e-5■□□□□ 11.1
NIPBLQ6KC79 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.42□□□□□ -2.021e-5■□□□□ 11.1
NIPBLQ6KC79 CEP350-205ENST00000429851 6096 ntTSL 1 (best)2.42□□□□□ -2.021e-5■□□□□ 11.1
NIPBLQ6KC79 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.42□□□□□ -2.021e-5■□□□□ 11.1
NIPBLQ6KC79 CAST-242ENST00000515063 654 ntTSL 1 (best)2.38□□□□□ -2.031e-7■□□□□ 11.1
NIPBLQ6KC79 MIR486-1-201ENST00000612171 68 ntBASIC2.36□□□□□ -2.031e-6■□□□□ 11.1
NIPBLQ6KC79 KIF21A-214ENST00000636569 6157 ntTSL 52.32□□□□□ -2.041e-5■□□□□ 11.1
NIPBLQ6KC79 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.041e-5■□□□□ 11.1
NIPBLQ6KC79 CHD9-216ENST00000565803 3625 ntTSL 52.21□□□□□ -2.061e-5■□□□□ 11.1
NIPBLQ6KC79 NUB1-209ENST00000483358 767 ntTSL 22.21□□□□□ -2.061e-5■□□□□ 11.1
NIPBLQ6KC79 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.92□□□□□ -2.11e-5■□□□□ 11.1
NIPBLQ6KC79 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.87□□□□□ -2.111e-5■□□□□ 11.1
NIPBLQ6KC79 CAST-238ENST00000512620 904 ntTSL 51.86□□□□□ -2.111e-7■□□□□ 11.1
NIPBLQ6KC79 THOC2-209ENST00000448128 1365 ntTSL 51.85□□□□□ -2.116e-7■□□□□ 11.1
NIPBLQ6KC79 BIRC6-203ENST00000444173 575 ntTSL 41.85□□□□□ -2.111e-6■□□□□ 11.1
NIPBLQ6KC79 ARHGEF12-210ENST00000530747 1930 ntTSL 51.85□□□□□ -2.111e-5■□□□□ 11.1
Retrieved 100 of 8,528 protein–RNA pairs in 64.2 ms