RNA–Protein interactions for RNA: ENST00000536325.1

CIT-207, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-207ENST00000536325 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
CIT-207ENST00000536325 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
CIT-207ENST00000536325 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
CIT-207ENST00000536325 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
CIT-207ENST00000536325 FOXD1Q16676 465 aa13.06□□□□□ -0.32
CIT-207ENST00000536325 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
CIT-207ENST00000536325 MSH5O43196 834 aa12.29□□□□□ -0.44
CIT-207ENST00000536325 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
CIT-207ENST00000536325 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
CIT-207ENST00000536325 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
CIT-207ENST00000536325 ADRA2BP18089 450 aa11.97□□□□□ -0.49
CIT-207ENST00000536325 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
CIT-207ENST00000536325 DMRT2Q9Y5R5 561 aa11.03□□□□□ -0.64
CIT-207ENST00000536325 SCAF1Q9H7N4 1312 aaKnown RBP10.91□□□□□ -0.66
CIT-207ENST00000536325 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
CIT-207ENST00000536325 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
CIT-207ENST00000536325 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
CIT-207ENST00000536325 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
CIT-207ENST00000536325 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
CIT-207ENST00000536325 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
CIT-207ENST00000536325 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
CIT-207ENST00000536325 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
CIT-207ENST00000536325 DNAJC5BQ9UF47 199 aa10.2□□□□□ -0.78
CIT-207ENST00000536325 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
CIT-207ENST00000536325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.812e-8■■■□□ 17.8
CIT-207ENST00000536325 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
CIT-207ENST00000536325 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
CIT-207ENST00000536325 DSG3P32926 999 aa9.73□□□□□ -0.85
CIT-207ENST00000536325 POTEHQ6S545 545 aa9.73□□□□□ -0.85
CIT-207ENST00000536325 SPINK5Q9NQ38 1064 aaPredicted RBP9.73□□□□□ -0.85
CIT-207ENST00000536325 CAPN15O75808 1086 aa9.71□□□□□ -0.86
CIT-207ENST00000536325 KCNA4P22459 653 aa9.57□□□□□ -0.88
CIT-207ENST00000536325 SLC4A2P04920 1241 aa9.54□□□□□ -0.88
CIT-207ENST00000536325 TRHP20396 242 aaPredicted RBP9.5□□□□□ -0.89
CIT-207ENST00000536325 ABCB7O75027 752 aa9.48□□□□□ -0.89
CIT-207ENST00000536325 NISCHQ9Y2I1 1504 aa9.45□□□□□ -0.9
CIT-207ENST00000536325 APLP2Q06481 763 aa9.44□□□□□ -0.9
CIT-207ENST00000536325 ZNF219Q9P2Y4 722 aaPredicted RBP9.44□□□□□ -0.9
CIT-207ENST00000536325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
CIT-207ENST00000536325 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
CIT-207ENST00000536325 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
CIT-207ENST00000536325 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
CIT-207ENST00000536325 POLA2Q14181 598 aa9.2□□□□□ -0.94
CIT-207ENST00000536325 CHRDL2Q6WN34 429 aa9.19□□□□□ -0.94
CIT-207ENST00000536325 MYCNP04198 464 aaPredicted RBP9.14□□□□□ -0.95
CIT-207ENST00000536325 SLC4A1APQ9BWU0 796 aaKnown RBP9.06□□□□□ -0.96
CIT-207ENST00000536325 AKT1S1Q96B36 256 aa9□□□□□ -0.97
CIT-207ENST00000536325 ATF5Q9Y2D1 282 aaPredicted RBP9□□□□□ -0.97
CIT-207ENST00000536325 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
CIT-207ENST00000536325 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
CIT-207ENST00000536325 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
CIT-207ENST00000536325 PIP4P2Q8N4L2 257 aa8.93□□□□□ -0.98
CIT-207ENST00000536325 OSCARQ8IYS5 282 aa8.89□□□□□ -0.99
CIT-207ENST00000536325 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
CIT-207ENST00000536325 HAX1O00165 279 aa8.84□□□□□ -0.99
CIT-207ENST00000536325 PITPNM1O00562 1244 aa8.84□□□□□ -0.99
CIT-207ENST00000536325 ZBTB22O15209 634 aa8.82□□□□□ -1
CIT-207ENST00000536325 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -11e-6■■□□□ 14.2
CIT-207ENST00000536325 EVX2Q03828 476 aa8.74□□□□□ -1.01
CIT-207ENST00000536325 SPDYE2BA6NHP3 402 aa8.66□□□□□ -1.02
CIT-207ENST00000536325 SPDYE6P0CI01 402 aa8.66□□□□□ -1.02
CIT-207ENST00000536325 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
CIT-207ENST00000536325 SPDYE2Q495Y8 402 aa8.66□□□□□ -1.02
CIT-207ENST00000536325 FBLN2P98095 1184 aa8.62□□□□□ -1.03
CIT-207ENST00000536325 PRKAR2AP13861 404 aaKnown RBP8.61□□□□□ -1.03
CIT-207ENST00000536325 EHMT2Q96KQ7 1210 aa8.59□□□□□ -1.03
CIT-207ENST00000536325 CLEC11AQ9Y240 323 aa8.59□□□□□ -1.03
CIT-207ENST00000536325 SPDYE1Q8NFV5 336 aaPredicted RBP8.57□□□□□ -1.04
CIT-207ENST00000536325 CSRNP3Q8WYN3 585 aa8.57□□□□□ -1.04
CIT-207ENST00000536325 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
CIT-207ENST00000536325 C19orf67A6NJJ6 358 aa8.55□□□□□ -1.04
CIT-207ENST00000536325 ZNF692Q9BU19 519 aaPredicted RBP8.53□□□□□ -1.04
CIT-207ENST00000536325 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
CIT-207ENST00000536325 CCDC180Q9P1Z9 1646 aa8.51□□□□□ -1.05
CIT-207ENST00000536325 GABBR2O75899 941 aa8.5□□□□□ -1.05
CIT-207ENST00000536325 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
CIT-207ENST00000536325 ABCC9O60706 1549 aa8.45□□□□□ -1.06
CIT-207ENST00000536325 LHX8Q68G74 356 aa8.44□□□□□ -1.06
CIT-207ENST00000536325 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
CIT-207ENST00000536325 PABPN1Q86U42 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
CIT-207ENST00000536325 POTEIP0CG38 1075 aa8.33□□□□□ -1.08
CIT-207ENST00000536325 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
CIT-207ENST00000536325 CD44P16070 742 aaKnown RBP8.3□□□□□ -1.08
CIT-207ENST00000536325 CLCN6P51797 869 aa8.24□□□□□ -1.09
CIT-207ENST00000536325 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
CIT-207ENST00000536325 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
CIT-207ENST00000536325 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
CIT-207ENST00000536325 CREBZFQ9NS37 354 aa8.15□□□□□ -1.1
CIT-207ENST00000536325 RB1CC1Q8TDY2 1594 aa8.14□□□□□ -1.11
CIT-207ENST00000536325 PLSCR2Q9NRY7 297 aa8.12□□□□□ -1.11
CIT-207ENST00000536325 NACADO15069 1562 aa8.1□□□□□ -1.11
CIT-207ENST00000536325 GALR2O43603 387 aaPredicted RBP8.1□□□□□ -1.11
CIT-207ENST00000536325 STAG3Q9UJ98 1225 aa8.09□□□□□ -1.11
CIT-207ENST00000536325 OTUD5Q96G74 571 aa8.07□□□□□ -1.12
CIT-207ENST00000536325 POTEB2H3BUK9 544 aa8.06□□□□□ -1.12
CIT-207ENST00000536325 MYO15BQ96JP2 1530 aa8.04□□□□□ -1.12
CIT-207ENST00000536325 PHF12Q96QT6 1004 aa8.03□□□□□ -1.12
CIT-207ENST00000536325 DCAF8L2P0C7V8 631 aa8.01□□□□□ -1.13
CIT-207ENST00000536325 SPDYE4A6NLX3 237 aa8□□□□□ -1.13
CIT-207ENST00000536325 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms