RNA–Protein interactions for RNA: ENST00000483358.5

NUB1-209, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-209ENST00000483358 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
NUB1-209ENST00000483358 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
NUB1-209ENST00000483358 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
NUB1-209ENST00000483358 PHF23Q9BUL5 403 aaPredicted RBP24.2■■□□□ 1.46
NUB1-209ENST00000483358 FOXD1Q16676 465 aa23.03■■□□□ 1.28
NUB1-209ENST00000483358 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
NUB1-209ENST00000483358 MSH5O43196 834 aa21.73■■□□□ 1.07
NUB1-209ENST00000483358 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
NUB1-209ENST00000483358 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
NUB1-209ENST00000483358 ADRA2BP18089 450 aa20.95■□□□□ 0.94
NUB1-209ENST00000483358 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
NUB1-209ENST00000483358 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
NUB1-209ENST00000483358 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
NUB1-209ENST00000483358 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
NUB1-209ENST00000483358 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
NUB1-209ENST00000483358 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
NUB1-209ENST00000483358 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
NUB1-209ENST00000483358 HOXD11P31277 338 aaPredicted RBP18.42■□□□□ 0.54
NUB1-209ENST00000483358 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
NUB1-209ENST00000483358 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
NUB1-209ENST00000483358 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
NUB1-209ENST00000483358 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
NUB1-209ENST00000483358 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
NUB1-209ENST00000483358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUB1-209ENST00000483358 POTEHQ6S545 545 aa17.41■□□□□ 0.38
NUB1-209ENST00000483358 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
NUB1-209ENST00000483358 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
NUB1-209ENST00000483358 DSG3P32926 999 aa17.14■□□□□ 0.33
NUB1-209ENST00000483358 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
NUB1-209ENST00000483358 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
NUB1-209ENST00000483358 CAPN15O75808 1086 aa17.06■□□□□ 0.32
NUB1-209ENST00000483358 KCNA4P22459 653 aa16.91■□□□□ 0.3
NUB1-209ENST00000483358 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
NUB1-209ENST00000483358 ABCB7O75027 752 aa16.64■□□□□ 0.25
NUB1-209ENST00000483358 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
NUB1-209ENST00000483358 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
NUB1-209ENST00000483358 APLP2Q06481 763 aa16.46■□□□□ 0.23
NUB1-209ENST00000483358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
NUB1-209ENST00000483358 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
NUB1-209ENST00000483358 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
NUB1-209ENST00000483358 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
NUB1-209ENST00000483358 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
NUB1-209ENST00000483358 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
NUB1-209ENST00000483358 POLA2Q14181 598 aa16.06■□□□□ 0.16
NUB1-209ENST00000483358 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
NUB1-209ENST00000483358 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
NUB1-209ENST00000483358 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
NUB1-209ENST00000483358 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
NUB1-209ENST00000483358 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
NUB1-209ENST00000483358 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
NUB1-209ENST00000483358 HAX1O00165 279 aa15.63■□□□□ 0.09
NUB1-209ENST00000483358 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
NUB1-209ENST00000483358 ZBTB22O15209 634 aa15.58■□□□□ 0.08
NUB1-209ENST00000483358 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
NUB1-209ENST00000483358 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
NUB1-209ENST00000483358 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
NUB1-209ENST00000483358 FXR2P51116 673 aaKnown RBP eCLIP15.54■□□□□ 0.08
NUB1-209ENST00000483358 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
NUB1-209ENST00000483358 EVX2Q03828 476 aa15.46■□□□□ 0.07
NUB1-209ENST00000483358 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
NUB1-209ENST00000483358 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
NUB1-209ENST00000483358 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
NUB1-209ENST00000483358 SPDYE6P0CI01 402 aa15.08■□□□□ 0
NUB1-209ENST00000483358 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
NUB1-209ENST00000483358 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
NUB1-209ENST00000483358 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
NUB1-209ENST00000483358 GABBR2O75899 941 aa15.02■□□□□ -0
NUB1-209ENST00000483358 LHX8Q68G74 356 aa15.01□□□□□ -0.01
NUB1-209ENST00000483358 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
NUB1-209ENST00000483358 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
NUB1-209ENST00000483358 FBLN2P98095 1184 aa14.94□□□□□ -0.02
NUB1-209ENST00000483358 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
NUB1-209ENST00000483358 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
NUB1-209ENST00000483358 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
NUB1-209ENST00000483358 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
NUB1-209ENST00000483358 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
NUB1-209ENST00000483358 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
NUB1-209ENST00000483358 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
NUB1-209ENST00000483358 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
NUB1-209ENST00000483358 PLSCR2Q9NRY7 297 aa14.6□□□□□ -0.07
NUB1-209ENST00000483358 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
NUB1-209ENST00000483358 CLCN6P51797 869 aa14.46□□□□□ -0.09
NUB1-209ENST00000483358 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
NUB1-209ENST00000483358 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
NUB1-209ENST00000483358 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
NUB1-209ENST00000483358 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
NUB1-209ENST00000483358 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
NUB1-209ENST00000483358 GALR2O43603 387 aaPredicted RBP14.25□□□□□ -0.13
NUB1-209ENST00000483358 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
NUB1-209ENST00000483358 POTEMA6NI47 508 aa14.17□□□□□ -0.14
NUB1-209ENST00000483358 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
NUB1-209ENST00000483358 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
NUB1-209ENST00000483358 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
NUB1-209ENST00000483358 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
NUB1-209ENST00000483358 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
NUB1-209ENST00000483358 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
NUB1-209ENST00000483358 FKBP8Q14318 412 aa13.97□□□□□ -0.17
NUB1-209ENST00000483358 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
NUB1-209ENST00000483358 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
NUB1-209ENST00000483358 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms