RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
CIT-208ENST00000537607 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
CIT-208ENST00000537607 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
CIT-208ENST00000537607 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
CIT-208ENST00000537607 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
CIT-208ENST00000537607 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
CIT-208ENST00000537607 APLP2Q06481 763 aa19.34■□□□□ 0.69
CIT-208ENST00000537607 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
CIT-208ENST00000537607 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
CIT-208ENST00000537607 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
CIT-208ENST00000537607 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
CIT-208ENST00000537607 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
CIT-208ENST00000537607 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
CIT-208ENST00000537607 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
CIT-208ENST00000537607 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
CIT-208ENST00000537607 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
CIT-208ENST00000537607 ZEB1P37275 1124 aaPredicted RBP18.62■□□□□ 0.57
CIT-208ENST00000537607 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
CIT-208ENST00000537607 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
CIT-208ENST00000537607 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
CIT-208ENST00000537607 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
CIT-208ENST00000537607 ABCC9O60706 1549 aa18.3■□□□□ 0.52
CIT-208ENST00000537607 ITGAEP38570 1179 aa18.25■□□□□ 0.51
CIT-208ENST00000537607 YTHDC1Q96MU7 727 aaKnown RBP18.23■□□□□ 0.51
CIT-208ENST00000537607 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
CIT-208ENST00000537607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
CIT-208ENST00000537607 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
CIT-208ENST00000537607 HRCP23327 699 aa18.13■□□□□ 0.49
CIT-208ENST00000537607 NEFLP07196 543 aa18.02■□□□□ 0.48
CIT-208ENST00000537607 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
CIT-208ENST00000537607 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
CIT-208ENST00000537607 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
CIT-208ENST00000537607 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
CIT-208ENST00000537607 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.44
CIT-208ENST00000537607 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
CIT-208ENST00000537607 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
CIT-208ENST00000537607 FBLN2P98095 1184 aa17.6■□□□□ 0.41
CIT-208ENST00000537607 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
CIT-208ENST00000537607 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
CIT-208ENST00000537607 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
CIT-208ENST00000537607 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
CIT-208ENST00000537607 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
CIT-208ENST00000537607 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
CIT-208ENST00000537607 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
CIT-208ENST00000537607 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
CIT-208ENST00000537607 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
CIT-208ENST00000537607 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
CIT-208ENST00000537607 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
CIT-208ENST00000537607 ANP32CO43423 234 aa17.26■□□□□ 0.35
CIT-208ENST00000537607 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
CIT-208ENST00000537607 BCANQ96GW7 911 aa17.19■□□□□ 0.34
CIT-208ENST00000537607 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
CIT-208ENST00000537607 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
CIT-208ENST00000537607 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
CIT-208ENST00000537607 MYT1Q01538 1121 aa17.17■□□□□ 0.34
CIT-208ENST00000537607 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
CIT-208ENST00000537607 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
CIT-208ENST00000537607 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
CIT-208ENST00000537607 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
CIT-208ENST00000537607 TONSLQ96HA7 1378 aa17■□□□□ 0.31
CIT-208ENST00000537607 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
CIT-208ENST00000537607 CLIP1P30622 1438 aa16.95■□□□□ 0.3
CIT-208ENST00000537607 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
CIT-208ENST00000537607 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
CIT-208ENST00000537607 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
CIT-208ENST00000537607 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
CIT-208ENST00000537607 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
CIT-208ENST00000537607 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
CIT-208ENST00000537607 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
CIT-208ENST00000537607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■■■■□ 21.3
CIT-208ENST00000537607 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
CIT-208ENST00000537607 NACADO15069 1562 aa16.86■□□□□ 0.29
CIT-208ENST00000537607 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
CIT-208ENST00000537607 BCL11AQ9H165 835 aa16.86■□□□□ 0.29
CIT-208ENST00000537607 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
CIT-208ENST00000537607 NEFMP07197 916 aa16.84■□□□□ 0.29
CIT-208ENST00000537607 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
CIT-208ENST00000537607 TSPY10P0CW01 314 aa16.84■□□□□ 0.29
CIT-208ENST00000537607 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
CIT-208ENST00000537607 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
CIT-208ENST00000537607 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
CIT-208ENST00000537607 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
CIT-208ENST00000537607 EEA1Q15075 1411 aa16.8■□□□□ 0.28
CIT-208ENST00000537607 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
CIT-208ENST00000537607 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
CIT-208ENST00000537607 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
CIT-208ENST00000537607 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
CIT-208ENST00000537607 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
CIT-208ENST00000537607 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
CIT-208ENST00000537607 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.27
CIT-208ENST00000537607 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.27
CIT-208ENST00000537607 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.27
CIT-208ENST00000537607 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
CIT-208ENST00000537607 FKBP8Q14318 412 aa16.74■□□□□ 0.27
CIT-208ENST00000537607 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
CIT-208ENST00000537607 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
CIT-208ENST00000537607 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
CIT-208ENST00000537607 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
CIT-208ENST00000537607 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
CIT-208ENST00000537607 MIER1Q8N108 512 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms