RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-238ENST00000512620 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
CAST-238ENST00000512620 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
CAST-238ENST00000512620 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
CAST-238ENST00000512620 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
CAST-238ENST00000512620 FOXD1Q16676 465 aa13.87□□□□□ -0.19
CAST-238ENST00000512620 MSH5O43196 834 aa13.11□□□□□ -0.31
CAST-238ENST00000512620 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
CAST-238ENST00000512620 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
CAST-238ENST00000512620 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
CAST-238ENST00000512620 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
CAST-238ENST00000512620 ADRA2BP18089 450 aa12.73□□□□□ -0.37
CAST-238ENST00000512620 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
CAST-238ENST00000512620 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
CAST-238ENST00000512620 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
CAST-238ENST00000512620 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
CAST-238ENST00000512620 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
CAST-238ENST00000512620 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
CAST-238ENST00000512620 DCAF8L1A6NGE4 600 aa11.21□□□□□ -0.61
CAST-238ENST00000512620 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
CAST-238ENST00000512620 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
CAST-238ENST00000512620 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
CAST-238ENST00000512620 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
CAST-238ENST00000512620 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
CAST-238ENST00000512620 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
CAST-238ENST00000512620 KCNA4P22459 653 aa10.85□□□□□ -0.67
CAST-238ENST00000512620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.699e-7■■■□□ 18.3
CAST-238ENST00000512620 NPM3O75607 178 aaKnown RBP10.68□□□□□ -0.7
CAST-238ENST00000512620 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
CAST-238ENST00000512620 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
CAST-238ENST00000512620 DSG3P32926 999 aa10.36□□□□□ -0.75
CAST-238ENST00000512620 SLC4A1APQ9BWU0 796 aaKnown RBP10.35□□□□□ -0.75
CAST-238ENST00000512620 CAPN15O75808 1086 aa10.34□□□□□ -0.75
CAST-238ENST00000512620 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
CAST-238ENST00000512620 SLC4A2P04920 1241 aa10.25□□□□□ -0.77
CAST-238ENST00000512620 APLP2Q06481 763 aa10.24□□□□□ -0.77
CAST-238ENST00000512620 POTEHQ6S545 545 aa10.21□□□□□ -0.77
CAST-238ENST00000512620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.18□□□□□ -0.78
CAST-238ENST00000512620 HNRNPUL2Q1KMD3 747 aaKnown RBP10.18□□□□□ -0.78
CAST-238ENST00000512620 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
CAST-238ENST00000512620 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
CAST-238ENST00000512620 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
CAST-238ENST00000512620 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
CAST-238ENST00000512620 ABCB7O75027 752 aa10.04□□□□□ -0.8
CAST-238ENST00000512620 ZBTB22O15209 634 aa10.01□□□□□ -0.81
CAST-238ENST00000512620 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
CAST-238ENST00000512620 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
CAST-238ENST00000512620 POLA2Q14181 598 aa9.83□□□□□ -0.84
CAST-238ENST00000512620 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
CAST-238ENST00000512620 CHRDL2Q6WN34 429 aa9.74□□□□□ -0.85
CAST-238ENST00000512620 ZBTB12Q9Y330 459 aaPredicted RBP9.68□□□□□ -0.86
CAST-238ENST00000512620 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
CAST-238ENST00000512620 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
CAST-238ENST00000512620 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
CAST-238ENST00000512620 ATXN8OSP0DMR3 200 aa9.48□□□□□ -0.89
CAST-238ENST00000512620 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
CAST-238ENST00000512620 SP7Q8TDD2 431 aaPredicted RBP9.48□□□□□ -0.89
CAST-238ENST00000512620 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
CAST-238ENST00000512620 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.94e-6■■■□□ 16.4
CAST-238ENST00000512620 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
CAST-238ENST00000512620 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
CAST-238ENST00000512620 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
CAST-238ENST00000512620 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
CAST-238ENST00000512620 HAX1O00165 279 aa9.33□□□□□ -0.92
CAST-238ENST00000512620 FBLN2P98095 1184 aa9.33□□□□□ -0.92
CAST-238ENST00000512620 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
CAST-238ENST00000512620 MKRN4PQ13434 485 aaPredicted RBP9.2□□□□□ -0.94
CAST-238ENST00000512620 FKBP8Q14318 412 aa9.2□□□□□ -0.94
CAST-238ENST00000512620 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
CAST-238ENST00000512620 EVX2Q03828 476 aa9.18□□□□□ -0.94
CAST-238ENST00000512620 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
CAST-238ENST00000512620 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
CAST-238ENST00000512620 CLEC11AQ9Y240 323 aa9.16□□□□□ -0.94
CAST-238ENST00000512620 C19orf67A6NJJ6 358 aa9.11□□□□□ -0.95
CAST-238ENST00000512620 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
CAST-238ENST00000512620 PABPN1Q86U42 306 aaKnown RBP eCLIP9.01□□□□□ -0.97
CAST-238ENST00000512620 GABBR2O75899 941 aa9□□□□□ -0.97
CAST-238ENST00000512620 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
CAST-238ENST00000512620 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
CAST-238ENST00000512620 CLCN6P51797 869 aa8.92□□□□□ -0.98
CAST-238ENST00000512620 LHX8Q68G74 356 aa8.89□□□□□ -0.99
CAST-238ENST00000512620 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
CAST-238ENST00000512620 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
CAST-238ENST00000512620 SPDYE4A6NLX3 237 aa8.85□□□□□ -0.99
CAST-238ENST00000512620 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
CAST-238ENST00000512620 STAG3Q9UJ98 1225 aa8.82□□□□□ -1
CAST-238ENST00000512620 POTEIP0CG38 1075 aa8.79□□□□□ -1
CAST-238ENST00000512620 ZNF579Q8NAF0 562 aaKnown RBP8.75□□□□□ -1.01
CAST-238ENST00000512620 CREBZFQ9NS37 354 aa8.74□□□□□ -1.01
CAST-238ENST00000512620 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
CAST-238ENST00000512620 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.02
CAST-238ENST00000512620 PROM2Q8N271 834 aa8.66□□□□□ -1.02
CAST-238ENST00000512620 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
CAST-238ENST00000512620 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
CAST-238ENST00000512620 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
CAST-238ENST00000512620 GALR2O43603 387 aaPredicted RBP8.61□□□□□ -1.03
CAST-238ENST00000512620 VASPP50552 380 aaPredicted RBP8.61□□□□□ -1.03
CAST-238ENST00000512620 MNX1P50219 401 aaPredicted RBP8.58□□□□□ -1.04
CAST-238ENST00000512620 IFNLR1Q8IU57 520 aaPredicted RBP8.54□□□□□ -1.04
CAST-238ENST00000512620 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
CAST-238ENST00000512620 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms