RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
CIT-201ENST00000261833 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
CIT-201ENST00000261833 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
CIT-201ENST00000261833 MYT1Q01538 1121 aa15.57■□□□□ 0.08
CIT-201ENST00000261833 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
CIT-201ENST00000261833 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
CIT-201ENST00000261833 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
CIT-201ENST00000261833 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
CIT-201ENST00000261833 PCGF6Q9BYE7 350 aa15.11■□□□□ 0.01
CIT-201ENST00000261833 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
CIT-201ENST00000261833 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
CIT-201ENST00000261833 APLP2Q06481 763 aa14.87□□□□□ -0.03
CIT-201ENST00000261833 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
CIT-201ENST00000261833 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
CIT-201ENST00000261833 HRCP23327 699 aa14.73□□□□□ -0.05
CIT-201ENST00000261833 TRIM26Q12899 539 aaPredicted RBP14.66□□□□□ -0.06
CIT-201ENST00000261833 NEFLP07196 543 aa14.6□□□□□ -0.07
CIT-201ENST00000261833 TRIM41Q8WV44 630 aa14.52□□□□□ -0.08
CIT-201ENST00000261833 YTHDC1Q96MU7 727 aaKnown RBP14.43□□□□□ -0.1
CIT-201ENST00000261833 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
CIT-201ENST00000261833 CCDC180Q9P1Z9 1646 aa14.35□□□□□ -0.11
CIT-201ENST00000261833 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
CIT-201ENST00000261833 DIEXFQ68CQ4 756 aaKnown RBP14.2□□□□□ -0.14
CIT-201ENST00000261833 DAXXQ9UER7 740 aaPredicted RBP14.15□□□□□ -0.14
CIT-201ENST00000261833 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
CIT-201ENST00000261833 MYT1LQ9UL68 1186 aa14.14□□□□□ -0.15
CIT-201ENST00000261833 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
CIT-201ENST00000261833 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
CIT-201ENST00000261833 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
CIT-201ENST00000261833 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
CIT-201ENST00000261833 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
CIT-201ENST00000261833 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
CIT-201ENST00000261833 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
CIT-201ENST00000261833 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
CIT-201ENST00000261833 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
CIT-201ENST00000261833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
CIT-201ENST00000261833 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
CIT-201ENST00000261833 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
CIT-201ENST00000261833 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
CIT-201ENST00000261833 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
CIT-201ENST00000261833 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
CIT-201ENST00000261833 ANP32CO43423 234 aa13.68□□□□□ -0.22
CIT-201ENST00000261833 ITGAEP38570 1179 aa13.66□□□□□ -0.22
CIT-201ENST00000261833 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
CIT-201ENST00000261833 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
CIT-201ENST00000261833 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
CIT-201ENST00000261833 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
CIT-201ENST00000261833 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
CIT-201ENST00000261833 GLIPR1L2Q4G1C9 344 aa13.55□□□□□ -0.24
CIT-201ENST00000261833 BCANQ96GW7 911 aa13.55□□□□□ -0.24
CIT-201ENST00000261833 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CIT-201ENST00000261833 FAM50AQ14320 339 aaKnown RBP13.47□□□□□ -0.25
CIT-201ENST00000261833 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
CIT-201ENST00000261833 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
CIT-201ENST00000261833 FKBP8Q14318 412 aa13.38□□□□□ -0.27
CIT-201ENST00000261833 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
CIT-201ENST00000261833 ABCC9O60706 1549 aa13.35□□□□□ -0.27
CIT-201ENST00000261833 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
CIT-201ENST00000261833 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
CIT-201ENST00000261833 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
CIT-201ENST00000261833 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
CIT-201ENST00000261833 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
CIT-201ENST00000261833 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
CIT-201ENST00000261833 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
CIT-201ENST00000261833 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
CIT-201ENST00000261833 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
CIT-201ENST00000261833 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
CIT-201ENST00000261833 NBR1Q14596 966 aa13.23□□□□□ -0.29
CIT-201ENST00000261833 EEA1Q15075 1411 aa13.23□□□□□ -0.29
CIT-201ENST00000261833 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
CIT-201ENST00000261833 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
CIT-201ENST00000261833 NACADO15069 1562 aa13.21□□□□□ -0.3
CIT-201ENST00000261833 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
CIT-201ENST00000261833 MIER1Q8N108 512 aa13.16□□□□□ -0.3
CIT-201ENST00000261833 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
CIT-201ENST00000261833 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
CIT-201ENST00000261833 CEP162Q5TB80 1403 aa13.15□□□□□ -0.3
CIT-201ENST00000261833 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
CIT-201ENST00000261833 ESF1Q9H501 851 aaKnown RBP13.14□□□□□ -0.31
CIT-201ENST00000261833 FBLN2P98095 1184 aa13.13□□□□□ -0.31
CIT-201ENST00000261833 HSP90AA1P07900 732 aaKnown RBP13.12□□□□□ -0.31
CIT-201ENST00000261833 CLIP1P30622 1438 aa13.11□□□□□ -0.31
CIT-201ENST00000261833 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
CIT-201ENST00000261833 DDX10Q13206 875 aaKnown RBP13.08□□□□□ -0.32
CIT-201ENST00000261833 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
CIT-201ENST00000261833 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
CIT-201ENST00000261833 WIZO95785 1651 aa13.06□□□□□ -0.32
CIT-201ENST00000261833 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
CIT-201ENST00000261833 NEFMP07197 916 aa13.04□□□□□ -0.32
CIT-201ENST00000261833 BECN1Q14457 450 aa13.04□□□□□ -0.32
CIT-201ENST00000261833 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
CIT-201ENST00000261833 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
CIT-201ENST00000261833 TMC1Q8TDI8 760 aa13□□□□□ -0.33
CIT-201ENST00000261833 A0A0G2JS52 829 aa12.99□□□□□ -0.33
CIT-201ENST00000261833 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
CIT-201ENST00000261833 TRIM44Q96DX7 344 aaPredicted RBP12.97□□□□□ -0.33
CIT-201ENST00000261833 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.34
CIT-201ENST00000261833 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
CIT-201ENST00000261833 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
CIT-201ENST00000261833 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms