RNA–Protein interactions for RNA: ENST00000530747.5

ARHGEF12-210, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 1,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-210ENST00000530747 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF12-210ENST00000530747 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
ARHGEF12-210ENST00000530747 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
ARHGEF12-210ENST00000530747 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF12-210ENST00000530747 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF12-210ENST00000530747 FOXD1Q16676 465 aa12.96□□□□□ -0.33
ARHGEF12-210ENST00000530747 MSH5O43196 834 aa12.91□□□□□ -0.34
ARHGEF12-210ENST00000530747 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
ARHGEF12-210ENST00000530747 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF12-210ENST00000530747 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF12-210ENST00000530747 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
ARHGEF12-210ENST00000530747 ADRA2BP18089 450 aa11.58□□□□□ -0.55
ARHGEF12-210ENST00000530747 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.55
ARHGEF12-210ENST00000530747 POTEHQ6S545 545 aa11.36□□□□□ -0.59
ARHGEF12-210ENST00000530747 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF12-210ENST00000530747 TTBK1Q5TCY1 1321 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF12-210ENST00000530747 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
ARHGEF12-210ENST00000530747 MYT1Q01538 1121 aa10.89□□□□□ -0.67
ARHGEF12-210ENST00000530747 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
ARHGEF12-210ENST00000530747 DMRT2Q9Y5R5 561 aa10.86□□□□□ -0.67
ARHGEF12-210ENST00000530747 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
ARHGEF12-210ENST00000530747 APLP2Q06481 763 aa10.82□□□□□ -0.68
ARHGEF12-210ENST00000530747 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
ARHGEF12-210ENST00000530747 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
ARHGEF12-210ENST00000530747 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
ARHGEF12-210ENST00000530747 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF12-210ENST00000530747 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
ARHGEF12-210ENST00000530747 C1QBPQ07021 282 aaKnown RBP10.63□□□□□ -0.71
ARHGEF12-210ENST00000530747 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
ARHGEF12-210ENST00000530747 AMER1Q5JTC6 1135 aaPredicted RBP10.5□□□□□ -0.73
ARHGEF12-210ENST00000530747 DCAF8L1A6NGE4 600 aa10.49□□□□□ -0.73
ARHGEF12-210ENST00000530747 ARXQ96QS3 562 aa10.44□□□□□ -0.74
ARHGEF12-210ENST00000530747 KCNA4P22459 653 aa10.31□□□□□ -0.76
ARHGEF12-210ENST00000530747 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF12-210ENST00000530747 TIMELESSQ9UNS1 1208 aa10.27□□□□□ -0.77
ARHGEF12-210ENST00000530747 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
ARHGEF12-210ENST00000530747 CSRNP3Q8WYN3 585 aa10.2□□□□□ -0.78
ARHGEF12-210ENST00000530747 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
ARHGEF12-210ENST00000530747 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
ARHGEF12-210ENST00000530747 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
ARHGEF12-210ENST00000530747 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF12-210ENST00000530747 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
ARHGEF12-210ENST00000530747 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF12-210ENST00000530747 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
ARHGEF12-210ENST00000530747 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
ARHGEF12-210ENST00000530747 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
ARHGEF12-210ENST00000530747 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
ARHGEF12-210ENST00000530747 PLSCR2Q9NRY7 297 aa9.94□□□□□ -0.82
ARHGEF12-210ENST00000530747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■□□□ 12.9
ARHGEF12-210ENST00000530747 BCANQ96GW7 911 aa9.86□□□□□ -0.83
ARHGEF12-210ENST00000530747 PODXL2Q9NZ53 605 aa9.82□□□□□ -0.84
ARHGEF12-210ENST00000530747 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
ARHGEF12-210ENST00000530747 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
ARHGEF12-210ENST00000530747 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
ARHGEF12-210ENST00000530747 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
ARHGEF12-210ENST00000530747 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
ARHGEF12-210ENST00000530747 CAPN15O75808 1086 aa9.61□□□□□ -0.87
ARHGEF12-210ENST00000530747 CHRDL2Q6WN34 429 aa9.56□□□□□ -0.88
ARHGEF12-210ENST00000530747 DSG3P32926 999 aa9.56□□□□□ -0.88
ARHGEF12-210ENST00000530747 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
ARHGEF12-210ENST00000530747 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
ARHGEF12-210ENST00000530747 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
ARHGEF12-210ENST00000530747 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.88
ARHGEF12-210ENST00000530747 SLC4A1APQ9BWU0 796 aaKnown RBP9.52□□□□□ -0.88
ARHGEF12-210ENST00000530747 U3KPZ7 1027 aaPredicted RBP9.51□□□□□ -0.89
ARHGEF12-210ENST00000530747 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
ARHGEF12-210ENST00000530747 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
ARHGEF12-210ENST00000530747 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF12-210ENST00000530747 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
ARHGEF12-210ENST00000530747 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF12-210ENST00000530747 ZNF219Q9P2Y4 722 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF12-210ENST00000530747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
ARHGEF12-210ENST00000530747 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
ARHGEF12-210ENST00000530747 LHX8Q68G74 356 aa9.37□□□□□ -0.91
ARHGEF12-210ENST00000530747 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
ARHGEF12-210ENST00000530747 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
ARHGEF12-210ENST00000530747 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
ARHGEF12-210ENST00000530747 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
ARHGEF12-210ENST00000530747 HRCP23327 699 aa9.32□□□□□ -0.92
ARHGEF12-210ENST00000530747 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
ARHGEF12-210ENST00000530747 HAX1O00165 279 aa9.26□□□□□ -0.93
ARHGEF12-210ENST00000530747 ABCB7O75027 752 aa9.25□□□□□ -0.93
ARHGEF12-210ENST00000530747 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
ARHGEF12-210ENST00000530747 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
ARHGEF12-210ENST00000530747 ZBTB22O15209 634 aa9.24□□□□□ -0.93
ARHGEF12-210ENST00000530747 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
ARHGEF12-210ENST00000530747 SAMD1Q6SPF0 538 aaPredicted RBP9.24□□□□□ -0.93
ARHGEF12-210ENST00000530747 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
ARHGEF12-210ENST00000530747 DCAF8L2P0C7V8 631 aa9.22□□□□□ -0.93
ARHGEF12-210ENST00000530747 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
ARHGEF12-210ENST00000530747 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
ARHGEF12-210ENST00000530747 FBLN2P98095 1184 aa9.11□□□□□ -0.95
ARHGEF12-210ENST00000530747 PDE4CQ08493 712 aa9.09□□□□□ -0.95
ARHGEF12-210ENST00000530747 CDK11AQ9UQ88 783 aaPredicted RBP9.07□□□□□ -0.96
ARHGEF12-210ENST00000530747 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
ARHGEF12-210ENST00000530747 CDK11BP21127 795 aaKnown RBP9.05□□□□□ -0.96
ARHGEF12-210ENST00000530747 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
ARHGEF12-210ENST00000530747 IGSF3O75054 1194 aa9.04□□□□□ -0.96
ARHGEF12-210ENST00000530747 FKBP8Q14318 412 aa9.03□□□□□ -0.96
ARHGEF12-210ENST00000530747 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms