RNA–Protein interactions for RNA: ENST00000398048.4

SCML2-202, Transcript of Scm polycomb group protein like 2, humanhuman

TSL 1 (best) BASIC

Gene SCML2, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2-202ENST00000398048 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
SCML2-202ENST00000398048 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
SCML2-202ENST00000398048 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
SCML2-202ENST00000398048 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
SCML2-202ENST00000398048 FOXD1Q16676 465 aa20.52■□□□□ 0.87
SCML2-202ENST00000398048 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
SCML2-202ENST00000398048 ADRA2BP18089 450 aa19.37■□□□□ 0.69
SCML2-202ENST00000398048 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
SCML2-202ENST00000398048 PIAS4Q8N2W9 510 aaPredicted RBP19.33■□□□□ 0.69
SCML2-202ENST00000398048 MSH5O43196 834 aa19.24■□□□□ 0.67
SCML2-202ENST00000398048 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
SCML2-202ENST00000398048 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
SCML2-202ENST00000398048 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
SCML2-202ENST00000398048 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
SCML2-202ENST00000398048 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
SCML2-202ENST00000398048 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
SCML2-202ENST00000398048 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
SCML2-202ENST00000398048 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
SCML2-202ENST00000398048 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SCML2-202ENST00000398048 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
SCML2-202ENST00000398048 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
SCML2-202ENST00000398048 KCNA4P22459 653 aa16.71■□□□□ 0.27
SCML2-202ENST00000398048 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
SCML2-202ENST00000398048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCML2-202ENST00000398048 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
SCML2-202ENST00000398048 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
SCML2-202ENST00000398048 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
SCML2-202ENST00000398048 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
SCML2-202ENST00000398048 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
SCML2-202ENST00000398048 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
SCML2-202ENST00000398048 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
SCML2-202ENST00000398048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
SCML2-202ENST00000398048 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
SCML2-202ENST00000398048 APLP2Q06481 763 aa15.76■□□□□ 0.11
SCML2-202ENST00000398048 CAPN15O75808 1086 aa15.66■□□□□ 0.1
SCML2-202ENST00000398048 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
SCML2-202ENST00000398048 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
SCML2-202ENST00000398048 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
SCML2-202ENST00000398048 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
SCML2-202ENST00000398048 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
SCML2-202ENST00000398048 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
SCML2-202ENST00000398048 DSG3P32926 999 aa15.41■□□□□ 0.06
SCML2-202ENST00000398048 ZBTB22O15209 634 aa15.29■□□□□ 0.04
SCML2-202ENST00000398048 ABCB7O75027 752 aa15.23■□□□□ 0.03
SCML2-202ENST00000398048 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
SCML2-202ENST00000398048 POLA2Q14181 598 aa15.1■□□□□ 0.01
SCML2-202ENST00000398048 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
SCML2-202ENST00000398048 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
SCML2-202ENST00000398048 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
SCML2-202ENST00000398048 ZBTB12Q9Y330 459 aaPredicted RBP14.93□□□□□ -0.02
SCML2-202ENST00000398048 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
SCML2-202ENST00000398048 FBLN2P98095 1184 aa14.68□□□□□ -0.06
SCML2-202ENST00000398048 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
SCML2-202ENST00000398048 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
SCML2-202ENST00000398048 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
SCML2-202ENST00000398048 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
SCML2-202ENST00000398048 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
SCML2-202ENST00000398048 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
SCML2-202ENST00000398048 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
SCML2-202ENST00000398048 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
SCML2-202ENST00000398048 POTEHQ6S545 545 aa14.3□□□□□ -0.12
SCML2-202ENST00000398048 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
SCML2-202ENST00000398048 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
SCML2-202ENST00000398048 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
SCML2-202ENST00000398048 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
SCML2-202ENST00000398048 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
SCML2-202ENST00000398048 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
SCML2-202ENST00000398048 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
SCML2-202ENST00000398048 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
SCML2-202ENST00000398048 ABCC9O60706 1549 aa13.99□□□□□ -0.17
SCML2-202ENST00000398048 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
SCML2-202ENST00000398048 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCML2-202ENST00000398048 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
SCML2-202ENST00000398048 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
SCML2-202ENST00000398048 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
SCML2-202ENST00000398048 HAX1O00165 279 aa13.73□□□□□ -0.21
SCML2-202ENST00000398048 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
SCML2-202ENST00000398048 PROM2Q8N271 834 aa13.63□□□□□ -0.23
SCML2-202ENST00000398048 FKBP8Q14318 412 aa13.61□□□□□ -0.23
SCML2-202ENST00000398048 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
SCML2-202ENST00000398048 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
SCML2-202ENST00000398048 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
SCML2-202ENST00000398048 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
SCML2-202ENST00000398048 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
SCML2-202ENST00000398048 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
SCML2-202ENST00000398048 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCML2-202ENST00000398048 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
SCML2-202ENST00000398048 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
SCML2-202ENST00000398048 NACADO15069 1562 aa13.4□□□□□ -0.26
SCML2-202ENST00000398048 EVX2Q03828 476 aa13.39□□□□□ -0.27
SCML2-202ENST00000398048 MIER1Q8N108 512 aa13.39□□□□□ -0.27
SCML2-202ENST00000398048 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
SCML2-202ENST00000398048 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
SCML2-202ENST00000398048 PLCD3Q8N3E9 789 aa13.33□□□□□ -0.28
SCML2-202ENST00000398048 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
SCML2-202ENST00000398048 CLCN6P51797 869 aa13.31□□□□□ -0.28
SCML2-202ENST00000398048 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
SCML2-202ENST00000398048 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
SCML2-202ENST00000398048 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
SCML2-202ENST00000398048 GABBR2O75899 941 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms