RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
CIT-217ENST00000545913 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
CIT-217ENST00000545913 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
CIT-217ENST00000545913 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
CIT-217ENST00000545913 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
CIT-217ENST00000545913 APLP2Q06481 763 aa18.37■□□□□ 0.53
CIT-217ENST00000545913 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
CIT-217ENST00000545913 FAM9AQ8IZU1 332 aaPredicted RBP18.2■□□□□ 0.5
CIT-217ENST00000545913 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
CIT-217ENST00000545913 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
CIT-217ENST00000545913 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
CIT-217ENST00000545913 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
CIT-217ENST00000545913 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
CIT-217ENST00000545913 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
CIT-217ENST00000545913 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
CIT-217ENST00000545913 RANGAP1P46060 587 aaPredicted RBP17.59■□□□□ 0.41
CIT-217ENST00000545913 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
CIT-217ENST00000545913 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
CIT-217ENST00000545913 NEFLP07196 543 aa17.49■□□□□ 0.39
CIT-217ENST00000545913 MYT1Q01538 1121 aa17.33■□□□□ 0.36
CIT-217ENST00000545913 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
CIT-217ENST00000545913 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
CIT-217ENST00000545913 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
CIT-217ENST00000545913 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
CIT-217ENST00000545913 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
CIT-217ENST00000545913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
CIT-217ENST00000545913 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
CIT-217ENST00000545913 ITGAEP38570 1179 aa16.9■□□□□ 0.3
CIT-217ENST00000545913 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
CIT-217ENST00000545913 HRCP23327 699 aa16.83■□□□□ 0.28
CIT-217ENST00000545913 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
CIT-217ENST00000545913 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
CIT-217ENST00000545913 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
CIT-217ENST00000545913 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
CIT-217ENST00000545913 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
CIT-217ENST00000545913 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
CIT-217ENST00000545913 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
CIT-217ENST00000545913 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
CIT-217ENST00000545913 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
CIT-217ENST00000545913 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
CIT-217ENST00000545913 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
CIT-217ENST00000545913 ANP32CO43423 234 aa16.35■□□□□ 0.21
CIT-217ENST00000545913 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
CIT-217ENST00000545913 ABCC9O60706 1549 aa16.33■□□□□ 0.2
CIT-217ENST00000545913 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
CIT-217ENST00000545913 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
CIT-217ENST00000545913 NEFMP07197 916 aa16.22■□□□□ 0.19
CIT-217ENST00000545913 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CIT-217ENST00000545913 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
CIT-217ENST00000545913 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
CIT-217ENST00000545913 FBLN2P98095 1184 aa16.15■□□□□ 0.18
CIT-217ENST00000545913 BCANQ96GW7 911 aa16.14■□□□□ 0.17
CIT-217ENST00000545913 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
CIT-217ENST00000545913 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
CIT-217ENST00000545913 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
CIT-217ENST00000545913 BCL11AQ9H165 835 aa16■□□□□ 0.15
CIT-217ENST00000545913 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
CIT-217ENST00000545913 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
CIT-217ENST00000545913 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
CIT-217ENST00000545913 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CIT-217ENST00000545913 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
CIT-217ENST00000545913 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
CIT-217ENST00000545913 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
CIT-217ENST00000545913 HSP90AA1P07900 732 aaKnown RBP15.9■□□□□ 0.14
CIT-217ENST00000545913 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
CIT-217ENST00000545913 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
CIT-217ENST00000545913 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
CIT-217ENST00000545913 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.13
CIT-217ENST00000545913 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
CIT-217ENST00000545913 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
CIT-217ENST00000545913 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
CIT-217ENST00000545913 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
CIT-217ENST00000545913 FKBP8Q14318 412 aa15.74■□□□□ 0.11
CIT-217ENST00000545913 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.74■□□□□ 0.11
CIT-217ENST00000545913 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
CIT-217ENST00000545913 TMC1Q8TDI8 760 aa15.71■□□□□ 0.11
CIT-217ENST00000545913 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
CIT-217ENST00000545913 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
CIT-217ENST00000545913 WDR43Q15061 677 aaKnown RBP eCLIP15.67■□□□□ 0.1
CIT-217ENST00000545913 DDX10Q13206 875 aaKnown RBP15.65■□□□□ 0.1
CIT-217ENST00000545913 CCDC136Q96JN2 1154 aa15.65■□□□□ 0.1
CIT-217ENST00000545913 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
CIT-217ENST00000545913 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
CIT-217ENST00000545913 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
CIT-217ENST00000545913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.092e-8■■■■□ 19.6
CIT-217ENST00000545913 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
CIT-217ENST00000545913 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
CIT-217ENST00000545913 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
CIT-217ENST00000545913 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
CIT-217ENST00000545913 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
CIT-217ENST00000545913 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
CIT-217ENST00000545913 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
CIT-217ENST00000545913 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
CIT-217ENST00000545913 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
CIT-217ENST00000545913 CLIP1P30622 1438 aa15.5■□□□□ 0.07
CIT-217ENST00000545913 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
CIT-217ENST00000545913 NBR1Q14596 966 aa15.49■□□□□ 0.07
CIT-217ENST00000545913 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
CIT-217ENST00000545913 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.07
CIT-217ENST00000545913 CDK11BP21127 795 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms