Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC10.63□□□□□ -0.712e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.732e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-213ENST00000554891 644 ntTSL 510.44□□□□□ -0.742e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-232ENST00000557442 1308 ntTSL 210.29□□□□□ -0.762e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC10.1□□□□□ -0.792e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC10.01□□□□□ -0.812e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-209ENST00000554383 1039 ntTSL 59.99□□□□□ -0.812e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-218ENST00000555215 781 ntTSL 59.99□□□□□ -0.812e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC9.78□□□□□ -0.842e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-216ENST00000555137 789 ntTSL 39.6□□□□□ -0.872e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.31□□□□□ -0.922e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.962e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.012e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.71□□□□□ -1.022e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.63□□□□□ -1.032e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-212ENST00000554539 748 ntTSL 58.55□□□□□ -1.042e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.61□□□□□ -1.192e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-210ENST00000554417 691 ntTSL 27.07□□□□□ -1.282e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-229ENST00000557157 698 ntTSL 54.84□□□□□ -1.632e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.892e-10■■□□□ 11.7
CSTF2P33240 HSD17B12-206ENST00000531185 611 ntTSL 415.98■□□□□ 0.151e-6■■□□□ 11.6
CSTF2P33240 HSD17B12-205ENST00000527433 559 ntTSL 414.39□□□□□ -0.111e-6■■□□□ 11.6
CSTF2P33240 AC068205.2-203ENST00000529261 748 ntTSL 39.79□□□□□ -0.841e-6■■□□□ 11.6
CSTF2P33240 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7□□□□□ -1.291e-6■■□□□ 11.6
CSTF2P33240 HSD17B12-214ENST00000638034 546 ntTSL 54.18□□□□□ -1.741e-6■■□□□ 11.6
CSTF2P33240 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.54□□□□□ -0.081e-9■■□□□ 11.6
CSTF2P33240 ASPH-206ENST00000517661 809 ntTSL 2 BASIC8.26□□□□□ -1.091e-9■■□□□ 11.6
CSTF2P33240 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.84□□□□□ -1.311e-9■■□□□ 11.6
CSTF2P33240 ASPH-210ENST00000517928 548 ntTSL 43.41□□□□□ -1.861e-9■■□□□ 11.6
CSTF2P33240 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.91□□□□□ -1.941e-9■■□□□ 11.6
CSTF2P33240 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.16■□□□□ 0.663e-7■■□□□ 11.6
CSTF2P33240 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.06□□□□□ -0.163e-7■■□□□ 11.6
CSTF2P33240 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-7■■□□□ 11.6
CSTF2P33240 HDAC2-215ENST00000523334 4810 ntTSL 23.63□□□□□ -1.833e-7■■□□□ 11.6
CSTF2P33240 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.96■□□□□ 0.141e-9■■□□□ 11.6
CSTF2P33240 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.73□□□□□ -0.211e-9■■□□□ 11.6
CSTF2P33240 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC12.03□□□□□ -0.481e-9■■□□□ 11.6
CSTF2P33240 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.511e-9■■□□□ 11.6
CSTF2P33240 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC11.76□□□□□ -0.531e-9■■□□□ 11.6
CSTF2P33240 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC11.01□□□□□ -0.651e-9■■□□□ 11.6
CSTF2P33240 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC9.07□□□□□ -0.961e-9■■□□□ 11.6
CSTF2P33240 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.041e-9■■□□□ 11.6
CSTF2P33240 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.12□□□□□ -1.111e-9■■□□□ 11.6
CSTF2P33240 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.03□□□□□ -1.121e-9■■□□□ 11.6
CSTF2P33240 ASPH-212ENST00000518306 755 ntTSL 57.23□□□□□ -1.251e-9■■□□□ 11.6
CSTF2P33240 ASPH-223ENST00000522349 531 ntTSL 54.61□□□□□ -1.671e-9■■□□□ 11.6
CSTF2P33240 ASPH-228ENST00000523927 556 ntTSL 43.88□□□□□ -1.791e-9■■□□□ 11.6
CSTF2P33240 RBM39-244ENST00000615771 686 ntTSL 55.38□□□□□ -1.553e-13■■□□□ 11.6
CSTF2P33240 RBM39-227ENST00000470563 384 ntTSL 34.89□□□□□ -1.633e-13■■□□□ 11.6
CSTF2P33240 RBM39-217ENST00000448303 1008 ntTSL 54.39□□□□□ -1.713e-13■■□□□ 11.6
CSTF2P33240 RBM39-229ENST00000475651 555 ntTSL 53.94□□□□□ -1.783e-13■■□□□ 11.6
CSTF2P33240 RBM39-228ENST00000471635 549 ntTSL 23.05□□□□□ -1.923e-13■■□□□ 11.6
CSTF2P33240 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.854e-7■■□□□ 11.5
CSTF2P33240 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.014e-7■■□□□ 11.5
CSTF2P33240 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.243e-7■■□□□ 11.5
CSTF2P33240 CHKA-206ENST00000531341 524 ntTSL 321.02■□□□□ 0.963e-7■■□□□ 11.5
CSTF2P33240 SMG7-205ENST00000440812 1190 ntTSL 520.71■□□□□ 0.913e-7■■□□□ 11.5
CSTF2P33240 SMG7-203ENST00000367538 328 ntTSL 218.53■□□□□ 0.563e-7■■□□□ 11.5
CSTF2P33240 PLD1-215ENST00000497307 1506 ntTSL 218.26■□□□□ 0.513e-7■■□□□ 11.5
CSTF2P33240 SMG7-206ENST00000444547 580 ntTSL 417.98■□□□□ 0.473e-7■■□□□ 11.5
CSTF2P33240 SMG7-213ENST00000507691 760 ntTSL 517.1■□□□□ 0.333e-7■■□□□ 11.5
CSTF2P33240 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 216.63■□□□□ 0.253e-7■■□□□ 11.5
CSTF2P33240 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.13e-7■■□□□ 11.5
CSTF2P33240 SMG7-210ENST00000502375 566 ntTSL 514.63□□□□□ -0.073e-7■■□□□ 11.5
CSTF2P33240 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.453e-7■■□□□ 11.5
CSTF2P33240 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC11.3□□□□□ -0.63e-7■■□□□ 11.5
CSTF2P33240 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.613e-7■■□□□ 11.5
CSTF2P33240 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.713e-7■■□□□ 11.5
CSTF2P33240 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.783e-7■■□□□ 11.5
CSTF2P33240 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.833e-7■■□□□ 11.5
CSTF2P33240 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.36□□□□□ -1.073e-7■■□□□ 11.5
CSTF2P33240 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.13e-7■■□□□ 11.5
CSTF2P33240 COPA-203ENST00000481040 578 ntTSL 34.86□□□□□ -1.633e-7■■□□□ 11.5
CSTF2P33240 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.843e-10■■□□□ 11.5
CSTF2P33240 DHRS2-203ENST00000432832 834 ntTSL 219.72■□□□□ 0.753e-10■■□□□ 11.5
CSTF2P33240 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)19.55■□□□□ 0.723e-10■■□□□ 11.5
CSTF2P33240 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.313e-10■■□□□ 11.5
CSTF2P33240 DHRS2-208ENST00000556729 5318 ntTSL 215.87■□□□□ 0.133e-10■■□□□ 11.5
CSTF2P33240 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)14.13□□□□□ -0.153e-10■■□□□ 11.5
CSTF2P33240 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.049e-7■■□□□ 11.5
CSTF2P33240 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.63■■□□□ 1.531e-6■■□□□ 11.4
CSTF2P33240 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.24e-7■■□□□ 11.4
CSTF2P33240 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.95■□□□□ 0.144e-7■■□□□ 11.4
CSTF2P33240 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.25■□□□□ 0.034e-7■■□□□ 11.4
CSTF2P33240 RPRD1A-211ENST00000592674 566 ntTSL 414.88□□□□□ -0.034e-7■■□□□ 11.4
CSTF2P33240 RPRD1A-208ENST00000589050 1022 ntTSL 1 (best)14.88□□□□□ -0.034e-7■■□□□ 11.4
CSTF2P33240 AC008969.1-206ENST00000547364 852 ntTSL 214.07□□□□□ -0.164e-7■■□□□ 11.4
CSTF2P33240 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.754e-7■■□□□ 11.4
CSTF2P33240 SLCO4A1-207ENST00000495889 543 ntTSL 317.03■□□□□ 0.321e-6■■□□□ 11.4
CSTF2P33240 SLCO4A1-204ENST00000466818 556 ntTSL 38.78□□□□□ -11e-6■■□□□ 11.4
CSTF2P33240 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.11□□□□□ -0.312e-7■■□□□ 11.4
CSTF2P33240 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.15□□□□□ -0.462e-7■■□□□ 11.4
CSTF2P33240 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.99□□□□□ -1.292e-7■■□□□ 11.4
CSTF2P33240 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.66□□□□□ -0.061e-6■□□□□ 11.3
CSTF2P33240 MTA3-211ENST00000467925 1672 ntTSL 513.82□□□□□ -0.21e-6■□□□□ 11.3
CSTF2P33240 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.33□□□□□ -0.281e-6■□□□□ 11.3
CSTF2P33240 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.71e-6■□□□□ 11.3
CSTF2P33240 MTA3-206ENST00000409019 2525 ntTSL 59.23□□□□□ -0.931e-6■□□□□ 11.3
CSTF2P33240 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -11e-6■□□□□ 11.3
CSTF2P33240 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.32□□□□□ -1.241e-6■□□□□ 11.3
Retrieved 100 of 6,735 protein–RNA pairs in 215.5 ms