RNA–Protein interactions for RNA: ENST00000519065.5

HDAC2-205, Transcript of histone deacetylase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC2, Length 9,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-205ENST00000519065 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
HDAC2-205ENST00000519065 MYT1Q01538 1121 aa19.54■□□□□ 0.72
HDAC2-205ENST00000519065 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.56
HDAC2-205ENST00000519065 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
HDAC2-205ENST00000519065 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
HDAC2-205ENST00000519065 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
HDAC2-205ENST00000519065 TTBK1Q5TCY1 1321 aaPredicted RBP18.1■□□□□ 0.49
HDAC2-205ENST00000519065 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
HDAC2-205ENST00000519065 NEFLP07196 543 aa17.7■□□□□ 0.42
HDAC2-205ENST00000519065 APLP2Q06481 763 aa17.6■□□□□ 0.41
HDAC2-205ENST00000519065 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
HDAC2-205ENST00000519065 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
HDAC2-205ENST00000519065 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
HDAC2-205ENST00000519065 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
HDAC2-205ENST00000519065 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
HDAC2-205ENST00000519065 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
HDAC2-205ENST00000519065 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
HDAC2-205ENST00000519065 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
HDAC2-205ENST00000519065 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
HDAC2-205ENST00000519065 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.3
HDAC2-205ENST00000519065 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
HDAC2-205ENST00000519065 HRCP23327 699 aa16.75■□□□□ 0.27
HDAC2-205ENST00000519065 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
HDAC2-205ENST00000519065 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
HDAC2-205ENST00000519065 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
HDAC2-205ENST00000519065 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
HDAC2-205ENST00000519065 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
HDAC2-205ENST00000519065 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
HDAC2-205ENST00000519065 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
HDAC2-205ENST00000519065 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
HDAC2-205ENST00000519065 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
HDAC2-205ENST00000519065 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
HDAC2-205ENST00000519065 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
HDAC2-205ENST00000519065 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
HDAC2-205ENST00000519065 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
HDAC2-205ENST00000519065 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
HDAC2-205ENST00000519065 ANP32EQ9BTT0 268 aa16.09■□□□□ 0.17
HDAC2-205ENST00000519065 NCLP19338 710 aaKnown RBP16.07■□□□□ 0.16
HDAC2-205ENST00000519065 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
HDAC2-205ENST00000519065 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
HDAC2-205ENST00000519065 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
HDAC2-205ENST00000519065 ANP32CO43423 234 aa15.99■□□□□ 0.15
HDAC2-205ENST00000519065 NEFMP07197 916 aa15.99■□□□□ 0.15
HDAC2-205ENST00000519065 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
HDAC2-205ENST00000519065 HSP90AA1P07900 732 aaKnown RBP15.87■□□□□ 0.13
HDAC2-205ENST00000519065 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
HDAC2-205ENST00000519065 CDK11BP21127 795 aaKnown RBP15.85■□□□□ 0.13
HDAC2-205ENST00000519065 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
HDAC2-205ENST00000519065 POLR3GLQ9BT43 218 aa15.79■□□□□ 0.12
HDAC2-205ENST00000519065 DDRGK1Q96HY6 314 aa15.73■□□□□ 0.11
HDAC2-205ENST00000519065 BCANQ96GW7 911 aa15.68■□□□□ 0.1
HDAC2-205ENST00000519065 BECN1Q14457 450 aa15.67■□□□□ 0.1
HDAC2-205ENST00000519065 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
HDAC2-205ENST00000519065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
HDAC2-205ENST00000519065 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
HDAC2-205ENST00000519065 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
HDAC2-205ENST00000519065 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
HDAC2-205ENST00000519065 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
HDAC2-205ENST00000519065 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.58■□□□□ 0.08
HDAC2-205ENST00000519065 PPM1GO15355 546 aaPredicted RBP15.54■□□□□ 0.08
HDAC2-205ENST00000519065 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
HDAC2-205ENST00000519065 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
HDAC2-205ENST00000519065 ITGAEP38570 1179 aa15.52■□□□□ 0.07
HDAC2-205ENST00000519065 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.07
HDAC2-205ENST00000519065 NBR1Q14596 966 aa15.51■□□□□ 0.07
HDAC2-205ENST00000519065 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
HDAC2-205ENST00000519065 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
HDAC2-205ENST00000519065 FKBP8Q14318 412 aa15.47■□□□□ 0.07
HDAC2-205ENST00000519065 GOLGA6L6A8MZA4 724 aa15.46■□□□□ 0.07
HDAC2-205ENST00000519065 NRDCO43847 1150 aa15.46■□□□□ 0.07
HDAC2-205ENST00000519065 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
HDAC2-205ENST00000519065 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
HDAC2-205ENST00000519065 PTMSP20962 102 aa15.43■□□□□ 0.06
HDAC2-205ENST00000519065 NAP1L5Q96NT1 182 aaPredicted RBP15.41■□□□□ 0.06
HDAC2-205ENST00000519065 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
HDAC2-205ENST00000519065 L1TD1Q5T7N2 865 aaKnown RBP15.39■□□□□ 0.05
HDAC2-205ENST00000519065 DNTTIP2Q5QJE6 756 aaKnown RBP15.37■□□□□ 0.05
HDAC2-205ENST00000519065 ZNF326Q5BKZ1 582 aaKnown RBP15.37■□□□□ 0.05
HDAC2-205ENST00000519065 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
HDAC2-205ENST00000519065 PTMAP06454 111 aaKnown RBP15.36■□□□□ 0.05
HDAC2-205ENST00000519065 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
HDAC2-205ENST00000519065 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
HDAC2-205ENST00000519065 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
HDAC2-205ENST00000519065 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
HDAC2-205ENST00000519065 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC2-205ENST00000519065 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
HDAC2-205ENST00000519065 MSNP26038 577 aaKnown RBP15.27■□□□□ 0.04
HDAC2-205ENST00000519065 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
HDAC2-205ENST00000519065 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
HDAC2-205ENST00000519065 CASC1Q6TDU7 716 aa15.26■□□□□ 0.03
HDAC2-205ENST00000519065 NOP58Q9Y2X3 529 aaKnown RBP15.25■□□□□ 0.03
HDAC2-205ENST00000519065 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
HDAC2-205ENST00000519065 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
HDAC2-205ENST00000519065 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
HDAC2-205ENST00000519065 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
HDAC2-205ENST00000519065 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
HDAC2-205ENST00000519065 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
HDAC2-205ENST00000519065 ARXQ96QS3 562 aa15.15■□□□□ 0.02
HDAC2-205ENST00000519065 A0A0U1RQG5 324 aaPredicted RBP15.12■□□□□ 0.01
HDAC2-205ENST00000519065 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms