Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CPNE9Q8IYJ1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
CPNE9Q8IYJ1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
CPNE9Q8IYJ1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CPNE9Q8IYJ1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CPNE9Q8IYJ1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.9■■□□□ 1.74
CPNE9Q8IYJ1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPNE9Q8IYJ1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPNE9Q8IYJ1 MIR762-201ENST00000390236 83 ntBASIC25.89■■□□□ 1.74
CPNE9Q8IYJ1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CPNE9Q8IYJ1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CPNE9Q8IYJ1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPNE9Q8IYJ1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPNE9Q8IYJ1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CPNE9Q8IYJ1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.88■■□□□ 1.73
CPNE9Q8IYJ1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CPNE9Q8IYJ1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CPNE9Q8IYJ1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CPNE9Q8IYJ1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CPNE9Q8IYJ1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPNE9Q8IYJ1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.86■■□□□ 1.73
CPNE9Q8IYJ1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPNE9Q8IYJ1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CPNE9Q8IYJ1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.85■■□□□ 1.73
CPNE9Q8IYJ1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CPNE9Q8IYJ1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CPNE9Q8IYJ1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CPNE9Q8IYJ1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPNE9Q8IYJ1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CPNE9Q8IYJ1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPNE9Q8IYJ1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPNE9Q8IYJ1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPNE9Q8IYJ1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.83■■□□□ 1.73
CPNE9Q8IYJ1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPNE9Q8IYJ1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPNE9Q8IYJ1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPNE9Q8IYJ1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.81■■□□□ 1.72
CPNE9Q8IYJ1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CPNE9Q8IYJ1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CPNE9Q8IYJ1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CPNE9Q8IYJ1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CPNE9Q8IYJ1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CPNE9Q8IYJ1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CPNE9Q8IYJ1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CPNE9Q8IYJ1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CPNE9Q8IYJ1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE9Q8IYJ1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CPNE9Q8IYJ1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE9Q8IYJ1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE9Q8IYJ1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE9Q8IYJ1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE9Q8IYJ1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.75■■□□□ 1.71
CPNE9Q8IYJ1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE9Q8IYJ1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE9Q8IYJ1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CPNE9Q8IYJ1 AC005559.1-201ENST00000589661 871 ntBASIC25.73■■□□□ 1.71
CPNE9Q8IYJ1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.73■■□□□ 1.71
CPNE9Q8IYJ1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.72■■□□□ 1.71
CPNE9Q8IYJ1 AL139393.2-201ENST00000608721 2025 ntBASIC25.71■■□□□ 1.71
CPNE9Q8IYJ1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.71■■□□□ 1.71
CPNE9Q8IYJ1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.71■■□□□ 1.71
CPNE9Q8IYJ1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE9Q8IYJ1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CPNE9Q8IYJ1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CPNE9Q8IYJ1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CPNE9Q8IYJ1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPNE9Q8IYJ1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPNE9Q8IYJ1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPNE9Q8IYJ1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPNE9Q8IYJ1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPNE9Q8IYJ1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE9Q8IYJ1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE9Q8IYJ1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE9Q8IYJ1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE9Q8IYJ1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.67■■□□□ 1.7
CPNE9Q8IYJ1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.67■■□□□ 1.7
CPNE9Q8IYJ1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.67■■□□□ 1.7
CPNE9Q8IYJ1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE9Q8IYJ1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CPNE9Q8IYJ1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.64■■□□□ 1.7
CPNE9Q8IYJ1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CPNE9Q8IYJ1 DUX4L28-201ENST00000623687 678 ntBASIC25.64■■□□□ 1.7
CPNE9Q8IYJ1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CPNE9Q8IYJ1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.63■■□□□ 1.69
CPNE9Q8IYJ1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.62■■□□□ 1.69
CPNE9Q8IYJ1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.62■■□□□ 1.69
CPNE9Q8IYJ1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPNE9Q8IYJ1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms